# Research Papers — 2026-05 · bundle page 47 of 326

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### Three-dimensional Conditional Diffusion Models for Cosmological 21 cm Lightcone Emulation

Authors: Bin Xia, John H. Wise
Published: 2026-05-27
Categories: astro-ph.IM, astro-ph.CO, cs.LG
arXiv: https://arxiv.org/abs/2605.29016v1

We investigate conditional diffusion modeling for three-dimensional 21 cm lightcone emulation, focusing on cubes with a sky-plane size of $64\times64$ and a line-of-sight depth up to 1024 cells. Relative to earlier 2D studies, the 3D setting is substantially harder because memory limits enforce very small micro-batches while the underlying voxel distribution is highly skewed and long tailed. We perform controlled comparisons across preprocessing choices, dynamic-range compression settings, architecture depth, and training duration using $25{,}600$ training lightcones and validation ensembles at fixed parameter points. For validation, each reference parameter point contains 800 21cmFAST realizations with independent initial conditions, and we use 800 samples per model and per reference set for the reported ensemble comparisons. We evaluate generated lightcones with complementary diagnostics in both image and summary-statistic spaces: brightness-temperature slices, the global signal, the power spectrum, and reduced scattering coefficients. Across the tested configurations, preprocessing is the dominant factor governing stable training and the resulting physical fidelity. Among the configurations explored here, Yeo-Johnson preprocessing combined with moderate amplitude compression gives the most consistently favorable trade-off, with the strongest quantitative support coming from rankings based on the standard-deviation-normalized mean absolute error ($\mathrm{MAE}_{\rm std}$) of the global signal and qualitatively compatible behavior in the complementary diagnostics. At the same time, visually plausible 3D samples still retain measurable biases in two-point and higher-order statistics. We therefore view the present work as a simulation-level baseline for three-dimensional 21 cm emulation and for future studies that incorporate more realistic observational effects.

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### Trajectory Constraints for Imaging Inverse Problems

Authors: Chaoyan Huang, Haijie Yuan, Saiprasad Ravishankar
Published: 2026-05-27
Categories: cs.CV
arXiv: https://arxiv.org/abs/2605.29012v1

Diffusion-based and iterative methods have become effective tools for solving imaging inverse problems. Their reconstruction process naturally forms a trajectory of intermediate estimates. Although these intermediate estimates define a reconstruction trajectory, most methods do not explicitly regularize the transitions between consecutive states. To address this limitation, we introduce TRACE, a training-free TRAjectory-Constrained rEconstruction framework that stabilizes the reconstruction path by coupling adjacent states along the trajectory. This gives a trajectory-level model that can be interpreted as a sequence of proximal updates. Since the exact proximal update is generally intractable, we approximate it with a neural mapping. This yields a diffusion-like reconstruction process with an explicit coupling between neighboring states. We provide a stability analysis showing that temporal coupling bounds trajectory variation and that this control is preserved under untrained network updates. Experiments on linear and nonlinear image reconstruction tasks show that TRACE improves reconstruction quality. Trajectory-level analyses and ablations confirm that temporal coupling directly affects state transitions along the reconstruction path.

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### Label-Free Reinforcement Learning via Cross-Model Entropy

Authors: Matt Gorbett, Hossein Shirazi
Published: 2026-05-27
Categories: cs.LG, cs.AI
arXiv: https://arxiv.org/abs/2605.29009v1

Post-training large language models with reinforcement learning is bottlenecked by the reward signal. Existing approaches require either ground-truth verifiable rewards, restricting training to domains with automatic correctness checks (e.g., mathematics, code execution), or human preference labels, which are expensive to collect and prone to reward hacking. Recent label-free methods replace ground-truth verifiers with self-referential signals like majority voting or token entropy over a model's own outputs, but risk reinforcing a model's own errors. In this work we propose Cross-Model Entropy (CME), the mean log-likelihood of a generator's response under a separate verifier model, as a label-free reward signal for RL post-training. CME is continuous, training-free, and grounded in the principle that responses a verifier finds unsurprising are likely correct or high quality. Because the verifier is independent of the generator, the signal cannot be gamed through self-consistency. We integrate CME into GRPO with no other changes to the training loop, extending label-free RL to open-ended instruction following -- a regime where self-referential signals are inapplicable or poorly suited. On open-ended instruction following (UltraFeedback prompts, evaluated on AlpacaEval 2.0), CME rewards beat the untrained base in head-to-head LLM-as-Judge comparisons across four model families (Qwen, Llama, Gemma, OLMo) and three training regimes (pretrained, SFT, and instruction-tuned), with tie-adjusted win rates ranging from 52.5% to 71.4%. Code will be released upon publication.

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### Causal Intelligence for Constraint-Aware Intervention Design to Induce State Transitions

Authors: Zixuan Song, Uwe Mueller, Dimitris V. Manatakis
Published: 2026-05-27
Categories: cs.LG
arXiv: https://arxiv.org/abs/2605.29008v1

Driving a system from one state to another through targeted interventions is a fundamental challenge in science, yet most predictive models offer limited mechanistic insight and no principled framework for decision-making. Here we present COAST (Causally Optimal Actions for State Transitions), a causal-intelligence approach for the in-silico design of constrained interventions that induce user-defined state transitions. Given data characterizing source and target states, COAST learns context-specific causal graphs and structural causal models, attributes observed distributional shifts to mechanism-level causal drivers, and introduces a novel constraint-aware multi-objective optimization formulation that balances transition efficacy, intervention complexity, and target-state stability. The approach is modular and domain-agnostic, integrating feature selection, causal discovery, causal modeling, and intervention identification and evaluation through interchangeable components. Across synthetic benchmarks and real biological datasets, COAST recovers key causal drivers and identifies robust single- and multi-target intervention strategies that achieve desired state transitions, accompanied by transparent mechanistic rationales to guide experimental validation.

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### Taxonomy-Targeted Error Generation for Quantitative Reasoning

Authors: Xinming Yang, Jun Li
Published: 2026-05-27
Categories: cs.CL
arXiv: https://arxiv.org/abs/2605.29007v2

Personalized tutoring, teacher preparation, and education research can benefit from worked errors annotated by the mechanisms that produced them. Authentic student errors with such cognitive labels are costly to collect and share, motivating the study of whether LLMs can generate taxonomy-targeted synthetic errors as complementary candidate material. We present a task-specific framework that generates errors targeted to a five-class Bloom-informed student-error taxonomy. A Generation Agent (GA) drafts a candidate erroneous solution conditioned on a target class, and an Examination Agent (EA) judges whether the draft is incorrect and class-consistent. The framework yields a reusable recipe for building class-stratified synthetic error datasets where authentic student corpora are unavailable. As a secondary diagnostic, targeted error generation is substantially harder than free-form incorrect-answer generation, and answer-grounding contributes more than expanded examples or external textbook content.

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### LoRe: Adaptive Interaction-Evaluation Routing with Per-Step Interaction Budgets for Iterative Graph Solvers

Authors: Jintao Li, Yong-Yi Wang, Zheng-An Wang, Heng Fan
Published: 2026-05-27
Categories: cs.LG, cs.AI
arXiv: https://arxiv.org/abs/2605.29005v1

Diffusion-based neural solvers for combinatorial optimization repeatedly re-evaluate dense edge/factor interactions, making inference expensive in wall-clock time and often memory-bound at scale. Inspired by the computational methodologies of many-body physics, we introduce LoRe, a training-free, inference-time drop-in wrapper that enforces per-step interaction-evaluation budgeting: at each iteration, it evaluates only a fixed fraction of interactions by dynamically routing computation to high-conflict or high-uncertainty interactions, instead of using a fixed sparsification (e.g., static kNN graphs or static masks). Under fully inclusive end-to-end wall-clock accounting, LoRe substantially improves scalability on the Maximum Independent Set (MIS) problem, extending feasible inference more than $3\times$ beyond the baseline's out-of-memory limit, delivering a $\sim 8\times$ speedup and a $\sim 12\times$ peak-memory reduction, with solution quality preserved in this regime. Demonstrating cross-task generality on the large-scale Traveling Salesperson Problem (TSP) and zero-shot robustness to topology shifts, LoRe achieves a $\sim 15\times$ speedup at $n=1000$ with a $44\times$ memory reduction and competitive tour quality.

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### Auditing Training-Free 3D Shape Retrieval with Diffused Geodesic Moments

Authors: Zhicheng Du, Changyue Liu, Wenji Xi, Zhaotian Xie, Zhuo Deng, Ziheng Zhang, Yang Liu, Lan Ma
Published: 2026-05-27
Categories: cs.CV, cs.GR
arXiv: https://arxiv.org/abs/2605.29004v1

Reported retrieval scores for training-free shape descriptors conflate local signal design, normalization, aggregation, codebook fitting, and metric choices, making isolated component evaluation difficult. This paper reframes descriptor evaluation as a {\em protocol audit}. We introduce Diffused Geodesic Moments (DGM), a seed-conditioned descriptor that computes sparse implicit heat responses, converts them to distance-like fields, and summarizes each vertex by low-order moments across seeds and scales. DGM is used both as a practical non-spectral baseline and as an instrument for isolating protocol effects. On the registered FAUST benchmark split (FAUST-Reg) and the TOSCA shape collection, aggregation-matched experiments show that an independent Geometric Moment Shape Descriptor baseline built on Heat Kernel Signature features (GMSD-HKS) obtains the highest scores in this implementation ($0.621/0.820$ and $0.865/0.963$ mean average precision (mAP)/top-1), Wave Kernel Signature (WKS) remains a strong classical signal, and DGM is useful mainly when sparse solves, non-spectral deployment, or symmetry-informative seed frames are priorities. The broader finding is methodological: the input field and aggregation protocol can dominate the moment formula. The paper contributes a reproducible protocol-cascade analysis, a cross-shape alignment diagnostic for functional-map compatibility, and concrete recommendations for designing and reporting training-free shape descriptors.

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### FedQHD: Closed-Form Function-Space Federated Reinforcement Learning

Authors: Yuchen Hou, Yongshan Chen, Zhuowen Zou, Calvin Yeung, Mohsen Imani, Tian Lan, Mahdi Imani
Published: 2026-05-27
Categories: cs.LG, cs.DC
arXiv: https://arxiv.org/abs/2605.29002v1

Federated reinforcement learning enables decentralized agents to collaboratively improve policies or value estimates without exchanging raw trajectories. However, FedAvg-style parameter averaging is not function-space consistent: when clients use heterogeneous encoders or even identical nonlinear networks, averaged parameters need not correspond to the weighted average of client value functions in any common function space. We propose FedQHD, a federated Q-learning method using hyperdimensional (random-feature) state encoders with a linear readout, so that Q-functions are nonlinear in state yet linear in trainable parameters. This linear structure enables closed-form aggregation. With a shared encoder, the function-space consensus update coincides exactly with weighted averaging of local readout matrices. With heterogeneous encoders, the server constructs a global teacher by averaging client Q-values on a shared anchor-state set, and each client compiles this teacher into its local representation via a single ridge projection. We formalize the federation gap -- the error incurred when compiling a federated teacher into a heterogeneous client representation -- relative to a client-specific oracle projection. We show that this gap decomposes into subspace misalignment, anchor-set conditioning, and regularization bias. We further identify the anchor-to-dimension ratio $m \geq D_i$ as the well-conditioned regime in which the gap reduces to a multiple of the encoder heterogeneity floor. On four continuous-state, discrete-action control benchmarks, FedQHD matches or outperforms FedAvg-style baselines and distillation-based alternatives while requiring substantially less computation, and the empirical dependence of the federation gap on encoder dimension matches our theoretical analysis.

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### FormInv: A Measurement Protocol for Semantic Invariance in Mathematical Reasoning Benchmarks

Authors: Nishal Thomas, Noel Thomas
Published: 2026-05-27
Categories: cs.LG, cs.AI
arXiv: https://arxiv.org/abs/2605.29001v1

A paraphrase-quality audit of MathCheck (ICLR 2025) detected 4 semantically incorrect paraphrases in 129 groups (3.1%); removing them drops GPT-4o from rank 2 to rank 4 and elevates Claude Haiku and DeepSeek V3 above it; these ranking changes are invisible to any single-model evaluation. Cross-model unanimity found these errors automatically (&gt;= 3/4 models for MathCheck; &gt;= 6/9 for our primary evaluation) for under $10; in our own dataset the same protocol found that 47% of auto-generated connective-variation paraphrases were semantically incorrect. That flaw compounds a deeper measurement gap: Claude Haiku 4.5 achieves 86% accuracy yet SCR=50%, meaning half its theorems are answered differently under semantically equivalent restatements, while aggregate accuracy across 9 models spans only 86-96% yet Semantic Consistency Rates (SCR) span 50-82% -- a 32-point gap invisible to standard benchmarks. Formally, for any target ranking over 9 frontier models there exists a weighting over paraphrase families that realizes it (No-Free-Benchmark corollary), because no model Pareto-dominates all families -- so benchmark designers who select families are implicitly choosing which model wins. FormInv supplies the audit protocol (replicated on external benchmarks at 100% recall), SCR and per-theorem Cochran's Q as primary invariance measures evaluated on 9 models across 366-811 items (on Lean4-verified theorems), and FormInvSelector for regime-aware model selection.

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### Text-Preserving Lossy Text Compression: A Study of Strategic Deletion and LLM Reconstruction

Authors: Yuchun Zou, Junhong Tong, Jun Li
Published: 2026-05-27
Categories: cs.CL
arXiv: https://arxiv.org/abs/2605.29000v1

Traditional lossless text compression preserves every byte, but its gains on natural language are often modest in realistic operating regimes. We study \emph{lossy semantic text compression}, where the encoder strategically deletes parts of the text and a large language model (LLM) reconstructs the original content from the retained skeleton. We benchmark a progression of deletion strategies, including uniform step deletion, word-length-guided deletion (WordLen), word-frequency-guided deletion (WordFreq), LP-optimized deletion (Opt), entropy-based deletion using GPT-2 surprisal, and hybrid methods that combine frequency and surprisal signals. Evaluation on the BBC News dataset across retention rates $\r_{keep} \in (0.1,0.9)$ shows three main findings. First, WordFreq is a strong low-cost baseline: despite using only a static frequency lookup, it remains competitive with much more expensive semantic methods while being far faster at the encoder. Second, semantic and hybrid methods provide their clearest gains at mild-to-moderate compression, whereas word-frequency deletion is often more robust at the lowest retention rates. Third, QLoRA fine-tuning yields a strong local decoder that is competitive with Gemini 2.0 Flash and is often strongest in decoder-only comparisons. Additional English and Chinese experiments show that the overall framework transfers across domains, while the best deletion rule remains dataset-dependent.

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### Measuring Real-World Prompt Injection Attacks in LLM-based Resume Screening

Authors: Mohan Zhang, Yuqi Jia, Zhen Tan, Steven Jiang, Neil Zhenqiang Gong, Tianlong Chen, Dawn Song
Published: 2026-05-27
Categories: cs.CR, cs.AI, cs.CL, cs.LG
arXiv: https://arxiv.org/abs/2605.28999v1

LLMs are vulnerable to prompt injection attacks. However, this vulnerability has been primarily demonstrated conceptually in academic studies or through a few anecdotal case studies. Its prevalence and impact in real-world LLM-based applications are largely unexplored. In this work, we present the first systematic study of prompt-injection attacks in a widely used application: LLM-based resume screening. Our analysis is based on approximately 200K real-world resumes collected over multiple years by hireEZ. We first design tailored methods to detect prompt injection in resumes. Manual validation on a small-scale dataset demonstrates that our detectors achieve high precision and outperform state-of-the-art general-purpose detectors. We then apply our detector to the full resume dataset and conduct a comprehensive measurement study of real-world prompt injection attacks. Our analysis reveals several intriguing findings: approximately 1% of resumes contain hidden prompt injections; the prevalence of such injected resumes has increased noticeably over the past one to two years; and more than 90% of injected prompts do not use explicit instructions. These results provide the first evidence of large-scale prompt injection in real-world LLM-based applications and lay the groundwork for future studies to understand and mitigate such attacks.

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### GAP3D: Generative Alignment of VLM Latents to Patch-Level Embeddings for 3D Generation

Authors: Polytimi Anna Gkotsi, Andrii Zadaianchuk, Mohammad Mahdi Derakhshani
Published: 2026-05-27
Categories: cs.CV
arXiv: https://arxiv.org/abs/2605.28995v2

Recent approaches integrating vision-language models (VLMs) as prompt encoders for generative model conditioning typically rely on expensive end-to-end training or map features to compressed representations, discarding the dense spatial structure required for geometry-aware tasks like 3D asset generation. To address this, we propose GAP3D, a modular, diffusion-based approach that aligns VLM-generated latents directly to the complete, patch-level feature space of a pre-trained image encoder, enabling a frozen downstream generative model to utilize a VLM as prompt encoder while maintaining a spatially structured conditioning signal. Evaluated on 3D asset generation, our method bypasses the need for large-scale 3D data by training mainly on general-domain image-text pairs. It also exhibits emergent zero-shot capabilities for multimodal prompts, despite being trained exclusively on text input. Finally, while currently prioritizing high-level semantics over fine-grained detail, GAP3D demonstrates that the representation gap between VLM and image-encoder feature spaces can be partially bridged through diffusion-based alignment, taking the first steps towards a modular integration of foundation models through generative alignment to dense embedding spaces.

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### BEAMS: Benchmarking and Evaluating AI for Modeling and Simulation

Authors: Sara Metcalf, William Schoenberg
Published: 2026-05-27
Categories: cs.AI
arXiv: https://arxiv.org/abs/2605.28994v1

AI tools to support real world decision making must be able to build simulation models that inform their recommendations and render them interpretable. Tools that can automate aspects of modeling practice must complement human expertise, not replace it. The BEAMS Initiative aims to guide the development of AI tools for modeling and simulation toward forms that are responsible and ethical by establishing benchmarks for human centered modeling and simulation practices. The initiative uses open digital and organizational infrastructure to collaboratively evaluate AI tools for modeling and simulation. The open source sd ai project hosted by the initiative establishes transparency and enables contributions to be shared broadly. A steering group focuses on prioritizing potential benchmarks, while a technical group focuses on implementing the benchmarks in the form of automated tests. Tests for several distinct categories of evaluation have been implemented and applied to AI tools that support qualitative model building, quantitative model building, and model discussion. These include tests for causal translation, model iteration, causal reasoning, conformance, model behavior explanation, suggested model building steps, and suggested model fixes. When engines from the sd ai project are coupled with different LLMs, their performance on these evaluations reveals variability across different AI tools. The evaluations implemented by the initiative demonstrate that AI enabled modeling tools perform better at discussion and basic qualitative tasks than with causal reasoning and quantitative error fixing. No single LLM dominates across engine types, highlighting the importance of specific tasks and tradeoffs between speed and accuracy. Ongoing efforts of the initiative aim to incorporate benchmarks that address concerns about bias by considering alternative perspectives and human centered use cases.

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### Learning Robust and Task-Invariant Functional Representation from fMRI through Siamese Self-Supervised Learning

Authors: Jiyao Wang, Peiyu Duan, Nicha C. Dvornek, Lawrence H. Staib, Denis Sukhodolsky, Pamela Ventola, James S. Duncan
Published: 2026-05-27
Categories: cs.LG
arXiv: https://arxiv.org/abs/2605.28990v1

Functional magnetic resonance imaging (fMRI) is a powerful tool for investigating human brain function. However, the high cost of data acquisition and the inherent subjectivity of psychiatric rating scales often lead to datasets with small sample sizes and variable label quality, especially when targeting a specific neurological condition. Combined with the inherently high dimensionality of fMRI data, these limitations substantially increase the risk of model overfitting. Recent years have seen growing interest in developing fMRI foundation models by combining multiple datasets; however, the computational resources needed for pretraining and fine-tuning are often prohibitive. We show that a lightweight self-supervised framework yields representations that generalize across diverse downstream tasks, outperforming fully supervised baselines and approaching the performance of large-scale models. We introduce BrainSimSiam, a data-efficient self-supervised representation learning framework that leverages positive-only data pairs to learn robust and generalizable features. We demonstrate that the learned representations achieve strong performance across multiple downstream classification and regression tasks, highlighting the potential of BrainSimSiam for data-limited neuroimaging applications.

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### The Hamilton-Jacobi Theory of Deep Learning

Authors: Jose Marie Antonio Miñoza, Erika Fille T. Legara, Christopher P. Monterola
Published: 2026-05-27
Categories: cs.LG, cs.AI, math.DS, math.RT, physics.comp-ph
arXiv: https://arxiv.org/abs/2605.28983v2

In this paper, training a neural network is identified, exactly, as a search through Hamilton--Jacobi initial-value problems: each gradient step selects the initial data of a viscous Hamilton--Jacobi equation whose Hopf--Cole propagator best fits the observations; at inference, the input is the spatial point at which that solution is evaluated and the initial condition is already encoded in the weights. The correspondence is exact for log-sum-exp layers, with ReLU, sigmoid, SiLU, and GELU each an exact limit, gradient, or moment of the same object, and exact in composition across depth and width, with a quantified error at finite depth that vanishes in the joint limit. It is structural for residual networks, transformers, and recurrent networks (RNNs, LSTMs, SSMs), each discretizing the same class of equations, at a named and quantified approximation error. A single deformation parameter $\varepsilon$ unifies all four perspectives (network, tropical algebra, viscous PDE, convex optimization) in a commutative diagram closed under Lipschitz conditions. Quantitative consequences include: the minimax optimal generalization rate $O(n^{-1/(d+2)})$ for fixed $t$; adversarial robustness controlled by $\varepsilon$; backpropagation as the co-state equation of the Hamiltonian system for residual networks (Pontryagin Maximum Principle); scaling exponents consistent with data intrinsic dimension via PDE quadrature; and a closed-form $O(N)$ influence function (softmax attribution weights $π_j$) whose entropy landscape undergoes fold bifurcations as $\varepsilon$ increases, each merging attribution basins.

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### Manifold-based Algorithms for the Hadamard Decomposition

Authors: Nicolas Gillis, Subhayan Saha, Stefano Sicilia, Arnaud Vandaele
Published: 2026-05-27
Categories: math.OC, cs.LG, eess.SP, math.NA
arXiv: https://arxiv.org/abs/2605.28980v1

Given a matrix $X$, and two ranks $r_1$ and $r_2$, the Hadamard decomposition (HD) looks for two low-rank matrices, $X_1$ of rank $r_1$ and $X_2$ of rank $r_2$, both of the same size as $X$, such that $X\approx X_1\circ X_2$, where $\circ$ is the Hadamard (element-wise) product. In most cases, HD is more expressive than standard low-rank approximations such as the truncated singular value decomposition (TSVD), as it can represent higher-rank matrices with the same number of parameters; this is because the rank of $X_1 \circ X_2$ is generically equal to $r_1 r_2$. In this paper, we first present some theoretical insights for HD, in particular a useful reformulation $X\approx WH^\top$ where $W$ and $H$ have $r_1 r_2$ columns and belong to certain manifolds. These allow us to develop three new algorithms for computing HD. The first one uses the representation $X\approx X_1\circ X_2$ and relies on the Manopt toolbox. The other two rely on the reformulation $X\approx WH^\top$: one is a block projected gradient method, and the other is a manifold-based gradient descent algorithm that does not require projection onto the feasible set. The last two algorithms are particularly effective for handling large sparse data. We also propose new initializations that allow us to improve the accuracy of the HD. We compare our algorithms and initialization strategies with the TSVD and with the state of the art. Numerical results show that the new methods are efficient and competitive on both synthetic and real data.

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### VFEAgent: A Multimodal Agent Framework for End-to-End Automated Finite Element Analysis

Authors: Jiachen Zhang, Junyi Lao, Chenghao Liu, Siyuan Liu, Shixin Wu, Linsen Zhang, Boyu Wang, Songfang Huang
Published: 2026-05-27
Categories: cs.AI, cs.CE
arXiv: https://arxiv.org/abs/2605.28978v2

Finite Element Analysis (FEA) serves as the cornerstone of modern engineering design. However, its workflow is inherently complex and relies heavily on domain expertise. Although recent efforts have integrated Large Language Models (LLMs) into FEA, existing approaches face limitations in handling multimodal inputs and executing complex tasks. To address these limitations, we propose VFEAgent, an end-to-end multi-agent system designed to automate FEA modeling and simulation directly from input images and problem descriptions. Our methodology integrates two core components: (1) a multimodal vision-language multi-agent pipeline that employs ReAct-driven reasoning to extract structured FEA specifications from heterogeneous inputs and (2) a verification-first code synthesis framework, incorporating robust self-debugging and fallback mechanisms to ensure executability and physical validity. We systematically evaluated the system across various engineering mechanics scenarios. The results demonstrate that VFEAgent achieves a high success rate in generating complete and physically valid simulations, outperforming LLM-based baseline methods in reliability and correctness. These findings validate the feasibility of automating the complete FEA workflow, highlighting the framework's potential to liberate engineers from tedious manual analysis.

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### Comparing Post-Hoc Explainable AI Methods for Interpreting Black-Box EEG Models in Depression Detection

Authors: Antonia Šarčević, Nikolina Frid
Published: 2026-05-27
Categories: cs.LG, cs.AI
arXiv: https://arxiv.org/abs/2605.28977v1

Recent advances in deep learning have enabled increasingly accurate electroencephalography (EEG)-based classification of Major Depressive Disorder (MDD), but the decision-making processes of high-capacity models remain difficult to interpret. This study investigates multiple post-hoc explainability methods applied to an InceptionTime architecture trained for EEG-based MDD detection. The analysis includes Shapley-based, gradient-based, and perturbation-based attribution approaches: DeepSHAP, Integrated Gradients, GradCAM, Occlusion, and Permutation Feature Importance. Explainability analysis was performed within a subject-level stratified 5-fold cross-validation framework using global attribution aggregation across EEG segments and subjects. The evaluated methods revealed partially convergent attribution patterns, with recurring emphasis on frontal, temporal, and posterior EEG regions, particularly in the right hemisphere. Quantitative comparison demonstrated substantial agreement between gradient- and perturbation-based approaches, while DeepSHAP produced comparatively distinct attribution distributions. At the same time, variability between explainability methods highlighted the influence of methodological assumptions on the resulting explanations. Overall, the results suggest that different post-hoc explainability approaches capture partially overlapping relevance structures in EEG-based deep learning models for depression detection. Although the observed attribution patterns are broadly consistent with several previous EEG studies of MDD, the analysis should be interpreted as exploratory rather than evidence of definitive neurophysiological biomarkers or clinical applicability. The study highlights both the usefulness and limitations of post-hoc explainability for interpreting black-box EEG classifiers in psychiatric applications.

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### A Training-Time Diagnostic for Generalization via the Log-Alignment Ratio

Authors: Ali Shehper, Ashish Vaswani
Published: 2026-05-27
Categories: cs.LG
arXiv: https://arxiv.org/abs/2605.28975v1

We study the log-alignment ratio (LAR), a measure of parameter-activation alignment, introduced in parameterization theory. We reformulate it as the overlap between a weight spectrum $p$ of the normalized squared singular values of a matrix and an activation spectrum $q$ of the normalized squared projections of inputs onto its singular directions. We show that unembedding LAR tracks the transition between memorization and generalization in two different settings by capturing the spread of $p$ and $q$ during training. In grokking, LAR predicts the effective dimension of the learned function: $k \approx n^{2(1-\text{LAR})}$, where $n$ is the input dimension of the matrix. In 3B-parameter language model pre-training, its deviation from a non-overfitting baseline tracks the generalization gap, and its rate of decline increases as overfitting approaches. LAR is computable from quantities available during the forward pass with negligible computational overhead, and requires no held-out validation data.

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### Beyond Recall: Behavioral Specification as an Interpretive Layer for AI Personalization

Authors: Aarik Gulaya
Published: 2026-05-27
Categories: cs.CL, cs.AI, cs.HC
arXiv: https://arxiv.org/abs/2605.28969v2

If an AI agent makes decisions on a person's behalf, those decisions must align with its user. We introduce representational accuracy to measure how faithfully a system captures a person's interpretation. An interpretive layer is operationalized as a Behavioral Specification. Our reference implementation aggressively compresses a person's data into interpretive patterns, served as context to a language model. We evaluate the Specification on a prototype benchmark of held-out behavioral predictions scored by a calibrated 5-judge LLM panel. We test it independently and in composition with a range of context conditions: full raw corpus, full extracted facts, and four commercial memory systems (Mem0, Letta, Supermemory, Zep). Across 14 public-domain autobiographical corpora, the Specification lifts representational accuracy in aggregate and nearly eliminates model hedging. It recovers most of what the raw corpus delivers, at ~25x less context cost. The Specification lifts subjects toward a common predictive level regardless of pretraining baseline; the lift in absolute points is therefore largest where the baseline is lowest, suggesting the population of relevance is anyone not adequately represented in pretraining. Lift is greatest on interpretation-required questions, where providing an interpretive layer enables model behavior that extracted facts or raw corpus do not. Conversely, on recall-required questions, this layer can interfere rather than help. We conclude that representational accuracy is distinct from recall and that human-AI alignment is dependent on how accurately the user is represented. Representational accuracy makes that alignment testable.

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### Beyond Recall: Behavioral Specification as an Interpretive Layer for AI Personalization

Authors: Aarik Gulaya
Published: 2026-05-27
Categories: cs.CL, cs.AI, cs.HC
arXiv: https://arxiv.org/abs/2605.28969v1

If an AI agent makes decisions on a person's behalf, those decisions must align with its user. We introduce representational accuracy to measure how faithfully a system captures a person's interpretation. An interpretive layer is operationalized as a Behavioral Specification. Our reference implementation aggressively compresses a person's data into interpretive patterns, served as context to a language model. We evaluate the Specification on a prototype benchmark of held-out behavioral predictions scored by a calibrated 5-judge LLM panel. We test it independently and in composition with a range of context conditions: full raw corpus, full extracted facts, and four commercial memory systems (Mem0, Letta, Supermemory, Zep). Across 14 public-domain autobiographical corpora, the Specification lifts representational accuracy in aggregate and nearly eliminates model hedging. It recovers most of what the raw corpus delivers, at ~25x less context cost. The Specification lifts subjects toward a common predictive level regardless of pretraining baseline; the lift in absolute points is therefore largest where the baseline is lowest, suggesting the population of relevance is anyone not adequately represented in pretraining. Lift is greatest on interpretation-required questions, where providing an interpretive layer enables model behavior that extracted facts or raw corpus do not. Conversely, on recall-required questions, this layer can interfere rather than help. We conclude that representational accuracy is distinct from recall and that human-AI alignment is dependent on how accurately the user is represented. Representational accuracy makes that alignment testable.

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### The Trust Paradox: How CS Researchers Engage LLM Leaderboards

Authors: Pouya Sadeghi, Anamaria Crisan, Jimmy Lin
Published: 2026-05-27
Categories: cs.CL, cs.HC
arXiv: https://arxiv.org/abs/2605.28966v1

Large language model (LLM) leaderboards rank AI models using standardized benchmarks and have become highly visible across computer science, despite known limitations in their reliability and robustness. Yet how they shape researchers' actual practice remains empirically uncharted. We address this gap through semi-structured interviews with eight researchers across four computer science subfields, analyzed using reflexive thematic analysis. We find a near-universal paradox of pragmatic skepticism: while participants expressed deep distrust of leaderboard rankings, they continued to use them as rough decision-making aids. Peer networks, not leaderboards, emerged as the primary model selection mechanism, and arena-based (human-voting) leaderboards were consistently preferred over static benchmark leaderboards. Leaderboard influence varied sharply across subfields, revealing that disciplinary culture, not individual attitudes, mediates engagement; for instance, NLP researchers faced state-of-the-art comparison pressure while HCI and Systems/Privacy researchers reported none. Across these differences, however, participants converged on cost transparency as the most demanded missing feature (seven of eight). We translate these findings into concrete design recommendations that align evaluation infrastructure with how researchers actually use it, such as task-specific score breakdowns, cost integration, and voter-demographic disclosure.

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### Frontier LLM-based agents can overcome the ontology curation bottleneck for natural phenotypes

Authors: James P. Balhoff, Hilmar Lapp
Published: 2026-05-27
Categories: cs.AI
arXiv: https://arxiv.org/abs/2605.28965v2

Linking free-text phenotype descriptions to ontology terms, typically referred to as phenotype annotation, is essential for the cross-study integration of comparative morphological data. This labor intensive process has heavily relied on highly trained human experts, which makes it challenging to scale and thus a key bottleneck. Dahdul et al. (2018) established a Gold Standard (GS) of Entity-Quality (EQ) annotations across seven phylogenetic studies and used it to evaluate three human curators and the Semantic CharaParser NLP tool with ontology-based semantic similarity metrics; they reported that machine-human consistency was significantly lower than inter-curator (human-human) consistency. Here we revisit that benchmark with five frontier hosted LLMs from Anthropic and OpenAI, each operating as an "agentic curator" within a self-contained workspace that supplies the source publication PDF, the same annotation guide used by the original human curators, the four project ontologies (UBERON, PATO, BSPO, GO), and a validation script. Evaluated against the same Gold Standard, every agent fell within the range of inter-curator variability of the three trained human biocurators of the original study; the best performing agents approached but did not reach the best performing human curator. Agents substantially outperformed Semantic CharaParser on all four metrics.

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### Resolving Endpoint Underfitting in Diffusion Bridges via Noise Alignment

Authors: Yurong Gao, Zicheng Zhang, Congying Han, Tiande Guo, Xinmin Qiu
Published: 2026-05-27
Categories: cs.CV
arXiv: https://arxiv.org/abs/2605.28962v1

Diffusion bridge models offer a powerful framework for connecting two data distributions, such as in image restoration and translation. Many existing methods learn this bridge by mimicking the score-matching formulation of standard diffusion models. In this work, we find that this way leads to an anomalous underfitting phenomenon near the target endpoint, as the process approaches the target distribution ($t \to 0$). This underfitting, characterized by significant drift in the predicted variance and direction, results from an excessively large discrepancy in noise levels between the network's input and its regression target.To resolve this issue, we propose the Noise-Aligned Diffusion Bridge (NADB).Our approach reformulates the diffusion bridge by first employing a mean network to provide a cleaner conditional target, and then introducing a novel, noise-aligned mapping relationship. This new formulation resolves the noise mismatch and corrects the underfitting near the target endpoint. Experimental validation across multiple image restoration and image translation tasks demonstrates the effectiveness of our approach. Code is available at https://github.com/gyr02/NADB.

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### Dynamics of Stochastic Momentum with Sparse Updates in High Dimensions

Authors: Katie Everett, Elliot Paquette
Published: 2026-05-27
Categories: stat.ML, cs.LG, math.OC
arXiv: https://arxiv.org/abs/2605.28961v1

Existing theory of momentum assumes that gradients arrive at every parameter at a roughly constant rate, an assumption violated in practice by heavy-tailed data distributions and modern architectures. We theoretically analyze the dynamics of two tractable models of momentum under sparse updates: a least squares model with sparse inputs and a logistic regression model with a rare class. Both admit exact closed-form second-moment dynamics whose high-dimensional limits we characterize across three scaling exponents for sparsity, batch size, and momentum decay. The phase structure on both problems is governed by the ratio of two intrinsic timescales: a momentum retention timescale (how many active updates the buffer survives) and a learning timescale (how many active updates it takes to reduce the squared error). When learning is much slower than retention, the limit matches SGD; when learning is faster, the system is unstable; where the timescales coincide, we recover classical heavy-ball dynamics. The oscillatory dynamics occur at different momentum values for different token sparsity, creating a spectral conflict for global momentum across token frequencies.

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### Optimal Rates for Differentially Private Hypothesis Testing with E-values

Authors: Ben Jacobsen, Tomas Gonzalez, Gavin Brown, Kassem Fawaz, Aaditya Ramdas
Published: 2026-05-27
Categories: cs.CR, cs.DS, cs.IT, cs.LG, math.ST
arXiv: https://arxiv.org/abs/2605.28952v2

E-values have attracted considerable interest in recent years as flexible tools for enabling anytime-valid and adaptive data analysis. Hypothesis testing is at the core of many of these applications, which can often involve private or sensitive data. In this work, we answer a simple but important question: given two distributions $\mathbb{P}$ and $\mathbb{Q}$, what is the maximum achievable e-power when testing $X\sim \mathbb{P}^n$ against $X\sim\mathbb{Q}^n$ with e-values that satisfy $\varepsilon$-differential privacy? We characterize the optimal rate for this problem and provide an algorithm which matches it exactly. In the sequential setting, when observations arrive one-by-one and the analyst chooses when to halt, we give matching upper and lower bounds on the stopping times of any private e-process. Numerical experiments confirm the practicality of our algorithms, which require less data than the recently proposed DP-SPRT across a range of sequential testing problems and privacy levels.

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### Neural Scaling Laws for Jet Generation

Authors: Oz Amram, Darius A. Faroughy, Tjarko Gerdes, Anna Hallin, Gregor Kasieczka, Michael Krämer, Humberto Reyes-Gonzalez, David Shih
Published: 2026-05-27
Categories: hep-ph, cs.LG, hep-ex, physics.data-an
arXiv: https://arxiv.org/abs/2605.28940v1

Recently observed empirical scaling laws describe the performance of foundation-type models as three independent key quantities -- dataset size, compute, and model parameters -- are modified. Extracting these scaling laws informs the training of large complex models for which the tuning of hyperparameters in traditional ways is not feasible. This work for the first time explores if scaling laws can also be observed for the task of particle jet generation -- both relevant as a pre-training objective for foundation models and as in-situ simulation by itself. We indeed replicate the key logarithmic scaling law behavior for model-size scaling. Beyond studying the next token prediction validation loss of the generative model, we also study the sliced Wasserstein distance of five physical quantities that are not immediately available to the model during training. Our study shows that this quantity is monotonically related to the next token prediction validation loss, meaning that this loss is indeed a good proxy for the physics performance. For the scaling with dataset size and compute, we observe substantially weaker scaling behavior of both the loss and the sliced Wasserstein distance. We analyze this behavior by introducing the concept of a learnable window, and argue that autoregressive next token prediction on jet constituents exhibits comparatively rapid saturation relative to language-model studies. We discuss possible origins of this behavior, including the stochastic nature of QCD radiation and differences between generative and supervised learning tasks in collider physics.

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### Conf-Gen: Conformal Uncertainty Quantification for Generative Models

Authors: Gabriel Loaiza-Ganem, Kevin Zhang, Wei Cui, Marc T. Law, Kin Kwan Leung
Published: 2026-05-27
Categories: cs.LG, cs.AI, stat.ML
arXiv: https://arxiv.org/abs/2605.28920v1

Conformal prediction (CP) and its extension, conformal risk control (CRC), are established frameworks for quantifying uncertainty in supervised machine learning through formal guarantees. However, recent breakthroughs in artificial intelligence (AI) have been driven by unsupervised generative models, such as large language models (LLMs) and image generators, which are not directly compatible with CP or CRC. In this work we introduce conformal generation (Conf-Gen), a general framework adapting CRC to generative tasks while relaxing its theoretical assumptions. Conf-Gen unifies and generalizes previous attempts to apply CP to LLMs, and extends conformal methodology to entirely new domains. We demonstrate the flexibility of Conf-Gen through some novel applications, including obtaining conformal guarantees on: image generators producing non-memorized images, conversational AI systems having asked enough clarifying questions, and the output of AI agents being correct.

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### CosmicFish-HRM: Adaptive Reasoning via Hierarchical Recurrent Mechanisms in Compact Language Models

Authors: Venkat Akhil Lakkapragada
Published: 2026-05-27
Categories: cs.LG, cs.AI, cs.CL
arXiv: https://arxiv.org/abs/2605.28919v1

Large language models have achieved strong reasoning capabilities, though often at the cost of massive parameter counts and expensive inference. In this work, we explore a different direction: adaptive reasoning depth in compact language models. We present CosmicFish-HRM, a compact language model built around a Hierarchical Reasoning Module (HRM) that dynamically allocates computational effort during inference. Instead of applying fixed computation to every input, the model iterates through high-level and low-level reasoning cycles and learns when to halt based on input complexity. CosmicFish-HRM combines this adaptive reasoning core with modern transformer components including Grouped Query Attention, RoPE, and SwiGLU activations. While the additional reasoning infrastructure introduces overhead at small scale, we hypothesize that this tradeoff becomes increasingly favorable as model size grows and the relative cost of the HRM core diminishes. Our results show that the model learns non-uniform reasoning behavior, allocating different numbers of reasoning steps across tasks and inputs. These findings suggest that adaptive reasoning depth may offer a promising alternative to relying solely on parameter scale for reasoning capability.

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### When LLM Reward Design Fails: Diagnostic-Driven Refinement for Sparse Structured RL

Authors: Youting Wang, Yuan Tang, Bowen Liu, Xuan Liu, Dingyan Shang
Published: 2026-05-27
Categories: cs.LG, cs.AI, cs.IR
arXiv: https://arxiv.org/abs/2605.28918v1

For sparse, structured reinforcement-learning tasks with semantic reward-function interfaces, LLM-generated reward shaping is better framed as debugging than one-shot generation. We study PPO-trained agents using MiniGrid as core evaluation and MuJoCo as boundary stress test. Our audit finds two dominant one-shot failure modes -- reward flooding and semantic/API misunderstanding -- plus a rarer weak-shaping case. We propose diagnostic-driven iterative refinement, where training diagnostics and a failure-mode taxonomy guide targeted reward-function revision. Refinement improves DoorKey-8x8 from 2.3% to 97.6% and KeyCorridor from 31.2% to 86.7% with high seed-to-seed variance. Controls show these gains are not from retrying or extra training: metrics-only re-prompting yields large drops, while a static-vocabulary control recovers much of the gap (87.6%; 70.7%), showing the taxonomy prompt is a major mechanism and dynamic labels provide only partially isolated incremental evidence. Budget-matched and Best-of-3 comparisons separate refinement from selection and training-time effects. Component-removal tests, sensitivity analyses, and an audit against author labels provide converging evidence for the debugging interpretation while revealing calibration limits. Continuous-control results show the boundary: success-based diagnostics can misfire in dense-reward locomotion, and return-trend feedback removes one false-positive mechanism without robust gains. The low-call protocol is a cost contrast with population-based reward search, not a benchmark comparison. In four crossed-variance-design environments, point estimates suggest larger gains when LLM reward-function variance dominates but bootstrap intervals are wide. The method is bounded to sparse structured tasks with reliable interfaces under PPO; fields like event_text may help, hurt, or be neutral.

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### Agentic AI for Gravitational Wave Data Analysis: A Head-to-Head Comparison of Coding Agents Executing a Matched Filter Pipeline on Einstein Telescope Simulated Data

Authors: Gianluca Inguglia
Published: 2026-05-27
Categories: astro-ph.IM, cs.AI, cs.HC
arXiv: https://arxiv.org/abs/2605.28916v3

We report a methodological study of agentic AI in gravitational-wave data analysis: two systems, Claude Code (Anthropic) and Codex (OpenAI), autonomously executed the same simple end-to-end pipeline on Einstein Telescope (ET) simulated data, on shared infrastructure and without human intervention. The object of study is the behaviour, reliability and auditability of the agents, not the physics output, used here as a controlled test case. The pipeline comprises power spectral density estimation from simulated ET noise, geometric template bank generation with IMRPhenomD waveforms, matched-filter recovery of 100 binary black hole injections, results generation, and LLM-assisted production of a LaTeX manuscript in Physical Review D style. Both agents received identical specifications and resources. The experiment was run twice: first with unrealistically loud injections, then with signals rescaled to a physically motivated SNR range. In both runs the results converged, with comparable detection efficiency and template bank size. The agents, however, behaved very differently: Claude Code finished in about 3.4 minutes with silent deviations from the specification, while Codex needed about 16 minutes across explicit self-correcting restarts, including an unsolicited optimization of the matched-filter inner loop. In the second run, a subtle difference in interpreting the SNR-range instruction produced a genuine scientific divergence: Claude Code silently raised the SNR floor to 8 (100% efficiency), while Codex followed the specification literally down to SNR 7 and recorded one missed detection. We discuss the implications - speed versus auditability, silent deviation versus explicit self-correction, instruction interpretation, and intermediate data representations in multi-model pipelines - for agentic AI in scientific workflows, within the limits of a single-pipeline, two-run benchmark.

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### First head-to-head comparison of agentic AI applied to the analysis of simulated data of the Einstein Telescope

Authors: Gianluca Inguglia
Published: 2026-05-27
Categories: astro-ph.IM, cs.AI, cs.HC
arXiv: https://arxiv.org/abs/2605.28916v2

We report a comparison of two state-of-the-art agentic AI systems, Claude Code (Anthropic) and Codex (OpenAI), tasked with autonomously executing a simple end-to-end gravitational wave data analysis pipeline on a shared computing infrastructure without human intervention. The pipeline comprises power spectral density estimation from raw Einstein Telescope simulated noise, geometric template bank generation, matched filter recovery of 100 binary black hole signal injections, automated results generation, and large language model-assisted production of a manuscript formatted in the style of Physical Review D. Both agents received identical written specifications and identical compute resources. The experiment was run twice: a first run with unrealistically loud injections, and a second run with signals rescaled to a physically motivated SNR range. The scientific results converged in both runs. However, the agents exhibited substantially different behaviors and computational costs: Claude Code completed the pipeline in ~3.4 minutes with silent deviations from the specification, while Codex required ~16 minutes across explicit self-correcting restarts, including an unsolicited performance optimization of the matched filter inner loop. The autonomously generated manuscripts also diverged in length, details, and quality. In the second run, a subtle difference in the interpretation of the SNR range instruction led to a genuine scientific divergence: Claude Code silently reinterpreted the instructions, while Codex followed the specification literally. We discuss the implications of these behavioral differences, such as speed versus auditability, silent versus transparent error handling, instruction interpretation, and the criticality of intermediate data representations in multi-model pipelines, for the deployment of agentic AI in scientific computing workflows.

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### AIRGuard: Guarding Agent Actions with Runtime Authority Control

Authors: Suliu Qin, Haomin Zhuang, Yujun Zhou, Yufei Han, Xiangliang Zhang
Published: 2026-05-27
Categories: cs.CR, cs.AI
arXiv: https://arxiv.org/abs/2605.28914v1

Tool-using language agents turn model decisions into external side effects: they read files, run scripts, call APIs, send messages, and invoke Model Context Protocol tools. This makes agent attacks different from jailbreaks. The harmful step is often not an obviously forbidden output, but an ordinary executable action that becomes unsafe because attacker-controlled context steers authorized access against the user's interest. We identify this failure mode as authority confusion: untrusted resources may inform reasoning, but they must not authorize side effects. We present AIRGuard, a runtime guard that operationalizes least privilege as action-time authorization. AIRGuard normalizes heterogeneous tool calls, derives task authority into step-level authority, tracks source and target trust, simulates sensitive side effects, audits cross-step risk, and enforces decisions before actions execute. On AgentTrap, AIRGuard reduces Sonnet 4.6 attack success from 36.3% without defense to 5.5%. On DTAP-150, AIRGuard preserves 76.0% benign utility with Haiku 4.5, compared with 52.0% for ARGUS and 42.0% for MELON. An ablation further shows that prompt-only policy helps only modestly, whereas a dedicated runtime authority-control layer gives the agent system direct control over tool-mediated side effects. Code and data are available at https://github.com/Sophie508/AIRGuard.

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### Reasoning that Travels: Dissecting How Chain-of-Thought Transfers Across Models

Authors: Xinyuan Cheng, Beiduo Chen, Philipp Mondorf, Barbara Plank
Published: 2026-05-27
Categories: cs.CL
arXiv: https://arxiv.org/abs/2605.28913v1

Large reasoning models (LRMs) often generate extensive chain-of-thought (CoT) traces before producing a final answer. As explicit textual artifacts, these traces can be passed to other models to solve the same task, enabling cross-model reasoning transfer. Yet successful transfer alone does not reveal how the provided CoT contributes to another model's answer. We study this question with a controlled provider--receiver framework, where a provider generates a reasoning trace and a receiver solves the same problem from increasingly longer trace prefixes. We compare force-answer, where the receiver answers directly from the prefix, with free-generation, where it may continue reasoning before answering. Across models and benchmarks, full traces often transfer successfully, but prefix trajectories reveal distinct mechanisms. In force-answer mode, AIME transfer is largely driven by explicit answer availability. MMLU-Pro instead reflects a larger role for receiver competence, while ZebraLogic depends on partial structured-answer information rather than complete-answer leakage alone. In free-generation mode, partial CoTs improve performance across benchmarks, indicating that prefixes can guide continued reasoning. Finally, answer agreement among receivers provides a gold-free signal for stopping provider reasoning early. Overall, cross-model CoT transfer is not a single phenomenon: it can reflect answer extraction, reasoning scaffolding, or receiver-dependent competence.

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### Cycle-Space Informed Detection of Autoencoded Blind False Data Injection Attacks on Power Systems

Authors: Xin Li, Chenhan Xiao, Jonathan Cohen, Aviad Elyashar, Yang Weng, Rami Puzis
Published: 2026-05-27
Categories: cs.LG, cs.CR
arXiv: https://arxiv.org/abs/2605.28912v2

The rapid growth of AI-driven data centers and large-scale energy storage systems is increasing the reliance of power system operation on real-time measurement data and automated decision-making. However, many existing detection methods rely on statistical or data-driven analysis of measurements and can fail when attackers exploit the same data structure to craft stealthy perturbations. To illustrate this limitation, we demonstrate a blind False Data Injection Attack (FDIA) in which an Autoencoder learns the measurement manifold and generates perturbations aligned with the Jacobian null space, thereby allowing the attack to evade both residual-based baddata detectors and time-series anomaly detectors. To mitigate data-driven FDIAs which exploit the null space, we propose a topology-informed Cycle-Space Detector (CSD) that leverages the Cycle-Space of the network to impose structural constraints that enhance null space estimation. In addition, we prove that by using the Minimum Cycle Basis (MCB), the proposed CSD achieves the optimal generalization error for attack detection. By exploiting topology-derived cycle constraints rather than relying solely on numerical null space estimation, the proposed method does not require precise line parameters and improves the separation between normal and attacked measurements. Simulation results on IEEE 14-, 30-, 57-, and 118-bus systems demonstrate that the proposed method effectively detects data-driven FDIAs under realistic measurement noise.

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### Hallucination Detection-Guided Preference Optimization for Clinical Summarization

Authors: Shamanth Kuthpadi Seethakantha, Dung Ngoc Thai, Vara Prasad Gudi, Simran Tiwari, Rami Matar, Avijit Mitra, Wenlong Zhao, Andrew McCallum, Wael Salloum
Published: 2026-05-27
Categories: cs.CL, cs.AI
arXiv: https://arxiv.org/abs/2605.28910v3

Large language models (LLMs) have shown promise on summarization tasks, but they often produce hallucinations, which are unsupported or incorrect statements that limit their reliability in specialized healthcare applications. We introduce Hallucination Detection Guided Self-Refinement (HDSR), an inference-time method that leverages hallucination detectors to guide iterative summary revisions toward factual corrections. Building on this, we propose HDSR for Preference Learning (HDSR-PL), which converts detector-guided refinement trajectories into preference pairs for model finetuning. Extensive experiments show that our methods substantially reduce hallucinations for Llama and Gemma models in summarizing real-world clinical notes from MIMIC-IV-Note v2.2. For example, HDSR reduces 24% and HDSR-PL reduces 48% hallucinations in Llama-3.1-8B-Instruct. Importantly, both methods preserve summary fluency, coherence, and relevance according to human expert and LLM-Jury evaluations. Together, these results demonstrate that detection-informed refinement and preference learning offer an automated solution for improving factual faithfulness in clinical summarization.

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### Sequential Physics-Constrained Neural Operator Forward Modeling for the $\textit{Norne}$ Reservoir System

Authors: Clement Etienam, Juntao Yang, Oleg Ovcharenko, Nick Luiken, Tsubasa Onishi, Nefeli Moridis, Issam Said
Published: 2026-05-27
Categories: cs.LG
arXiv: https://arxiv.org/abs/2605.28909v1

We develop a comprehensive mathematical and computational framework for sequential surrogate modeling of three-phase black-oil reservoir dynamics using neural operators, with particular emphasis on Fourier Neural Operators (FNO) and their physics-informed variant (PINO). The application focus is the Norne benchmark reservoir, defined on a heterogeneous $46\times112\times22$ grid ($N=113,344$ cells), with a production history spanning $T=30$ timesteps covering 3298 days. Our theoretical contributions are organized around four interlocking problems: (1) functional-analytic formulation in a product-Sobolev-space setting, including well-posedness of the implicit timestep map and sharp local Lipschitz estimates; (2) covariate shift quantification, proving that the Wasserstein-2 distance grows as $W_2 \leq \varepsilon(L^n-1)/(L-1)$, with exponential population-risk discrepancy for $L&gt;1$; (3) physics-constrained spectral stability, showing PINO training with $λ_R \geq λ^*_R$ reduces the learned Jacobian spectral radius to $ρ_F + Cλ_R^{-1/2}$, yielding uniform-in-time rollout error $|δ_n| \leq \varepsilon/(1-ρ)$; and (4) $K$-step TBPTT gradient analysis, deriving geometric bias decay $O(ρ^K)$, optimal window $K^ = O(\log(T/σ^2))$, and Adam convergence $O(1/\sqrt{t}) + O(ρ^{K^*})$. Empirical validation confirms all theoretical predictions: autoregressive PINO surrogates sustain $R^2&gt;0.99$ (oil), $R^2&gt;0.90$ (gas), $R^2\approx 0.80$ (pressure), and monotonically improving $R^2$ (water) across the full 3298-day horizon, trained on eight NVIDIA B200 GPUs in under one hour. A 1000-member ensemble runs in under one minute on a single B200 GPU, giving a ${\sim}10^4\times$ wall-clock speedup over the OPM finite-volume simulator.

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### Orthogonal Concept Erasure for Diffusion Models

Authors: Yuhao Sun, Lingyun Yu, Haoxiang Xu, Fengyuan Miao, Zhuoer Xu, Hongtao Xie
Published: 2026-05-27
Categories: cs.AI
arXiv: https://arxiv.org/abs/2605.28902v1

Concept erasure has emerged as a promising approach to mitigate undesired or unsafe content in diffusion models, yet existing methods still face significant limitations. While training-based methods are effective, their high computational cost limits scalability. Editing-based methods are more efficient and deployment-friendly, yet they struggle to simultaneously achieve precise concept erasure and preserve overall generative capacity. We identify this core limitation of the editing-based methods as reliance on additive parameter updates. Our empirical analysis reveals that concept semantics primarily depend on neuron direction rather than neuron magnitude, while overall generative capacity relies on the angular geometry of neurons. As additive updates inherently entangle direction, magnitude, and angular geometry, they inevitably introduce unintended interference between concept erasure and overall generation performance. To address this, we propose Orthogonal Concept Erasure (OCE), which reformulates editing-based erasure as multiplicative parameter updates from a geometric perspective. Specifically, OCE applies layer-wise orthogonal transformations derived from a closed-form solution to the parameters, enabling precise concept erasure while preserving the neuron magnitude and angular geometry. Furthermore, to address conflicting constraints in multi-concept erasure, OCE introduces a subspace-level objective with structured subspace manipulation, yielding a more effective and scalable erasure. Extensive experiments on single- and multi-concept erasure demonstrate that OCE outperforms existing methods in concept erasure and non-target preservation, erasing up to 100 concepts in 4.3 s. Code: https://github.com/HansSunY/OCE.

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### Spectral Guidance for Flexible and Efficient Control of Diffusion Models

Authors: Gabriel Moreira, Manuel Marques, João Paulo Costeira, Chenyan Xiong
Published: 2026-05-27
Categories: cs.LG
arXiv: https://arxiv.org/abs/2605.28900v1

We introduce Spectral Guidance, a framework for controlling diffusion models by leveraging the intrinsic geometry of the generative process. As data is progressively corrupted by noise, only a small number of features remain informative for control. We characterize them as the singular functions of a conditional expectation operator and show that they can be learned via a self-supervised objective. Once recovered, this basis enables the projection of arbitrary guidance signals, such as labels, CLIP embeddings, or masks, directly onto the sampling trajectory. This approach allows for stable, high-fidelity control without retraining or denoiser backpropagation during sampling. Empirically, we improve conditional accuracy on CIFAR-10 by 37 percentage points over the strongest training-free baseline while offering $4\times$ faster sampling. Moreover, the same representations that support label and CLIP guidance also enable spatial control, such as mask-based guidance, without auxiliary models. Finally, our framework reveals a phase transition in the generative process, pinpointing the optimal time window for effective guidance.

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### Quantum-Enhanced Adversarial Robustness in Artificial Intelligence

Authors: Jaydip Sen
Published: 2026-05-27
Categories: cs.CR, cs.AI
arXiv: https://arxiv.org/abs/2605.28899v1

Artificial Intelligence has achieved remarkable success across diverse application domains. However, its vulnerability to adversarial attacks poses significant challenges to reliability, security, and trustworthiness. Adversarial machine learning demonstrates that even highly accurate models can be manipulated through carefully crafted perturbations, raising serious concerns in safety critical systems such as healthcare, finance, and autonomous technologies. In parallel, quantum computing has emerged as a transformative paradigm capable of addressing complex computational problems through principles such as superposition, entanglement, and quantum interference. The convergence of these fields has led to the emergence of quantum artificial intelligence, which explores how quantum techniques can enhance learning efficiency, scalability, and robustness. This chapter provides a comprehensive overview of adversarial machine learning and existing defense strategies, followed by an accessible introduction to quantum computing and quantum machine learning models. It further presents conceptual frameworks for quantum-enhanced adversarial robustness, emphasizing quantum optimization, feature mapping, and hybrid quantum classical architectures. Practical applications, key challenges, and future research directions are also discussed to support the development of secure and trustworthy AI systems.

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### Review Arcade: On the Human Alignment and Gameability of LLM Reviews

Authors: Hans Ole Hatzel, Sebastian Steindl, Jan Strich
Published: 2026-05-27
Categories: cs.AI, cs.MA
arXiv: https://arxiv.org/abs/2605.28897v1

LLM-generated reviews for scientific papers are gaining considerable traction and are even being officially piloted by major conferences. We have to assume that not only reviewers are using LLM-assistance, but also that authors use LLMs to revise their papers before submitting. In this work, we perform empirical experiments on papers from the 2025 ACL Rolling Review (ARR) to evaluate LLM reviews from both the author and the reviewer perspective. First, we identify a limited alignment of LLM reviews with human ones. In the best-case scenario, the alignment is reasonable. However, we also find that LLM-human alignment varies substantially across prompts and models. Finally, we investigate the scenario in which the author uses an iterative draft-revise workflow to improve the submission according to the LLM review. We find that this "gaming" of LLM reviews can be effective in specific scenarios, leading to a statistically significant increase of overall scores for up to 35\% of papers. We publish our code: https://github.com/uhh-hcds/reviewarcade.

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### Feature Geometry of LoRA Adapters: A Sparse Autoencoder Analysis of Representational Divergence in Fine-Tuned Language Models

Authors: Prasanth K K
Published: 2026-05-27
Categories: cs.LG
arXiv: https://arxiv.org/abs/2605.28896v1

Low-Rank Adaptation (LoRA) has emerged as a widely adopted approach for adapting large language models, yet the internal representational changes induced by LoRA fine-tuning remain insufficiently understood. In this work, we investigate the geometry of LoRA-induced representations using Sparse Autoencoders (SAEs). We introduce a delta activation framework that isolates the adapter-specific contribution to the residual stream. Using Gemma-2-9B with LoRA ranks 4, 8, 16, and 32, we train adapter-specific SAEs across multiple transformer layers and compare their learned feature spaces with pretrained SAE dictionaries. We evaluate representational alignment using cosine similarity between decoder directions, principal-angle analysis of feature subspaces, and Centered Kernel Alignment (CKA) between activation representations. Across layers and ranks, we consistently observe comparatively weak geometric alignment between LoRA-induced feature dictionaries and pretrained SAE features. Adapter-specific SAEs also reconstruct delta activations more effectively than pretrained SAEs, suggesting that LoRA updates occupy partially distinct representational structure within the residual stream. Additionally, feature density increases with rank and depth, while geometric divergence remains relatively stable across ranks. These findings provide empirical evidence that LoRA fine-tuning can induce feature structures that are not fully captured by pretrained interpretability dictionaries, with implications for mechanistic interpretability, adaptation analysis, and safety auditing of fine-tuned language models.

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### Saddle Networks: Structure-Preserving Architectures for Convex-Concave Functions

Authors: Xavier Warin
Published: 2026-05-27
Categories: math.OC, stat.ML
arXiv: https://arxiv.org/abs/2605.28894v1

Saddle-point models arise throughout optimization, optimal transport, robust learning, and control. In many applications, the relevant function f(x,y) is convex in x and concave in y, and preserving this geometry is essential for obtaining tractable min--max formulations and reliable certificates. We introduce a structured separable decomposition that preserves the convex-concave geometry and prove a complete one-dimensional approximation theorem under a mixed Monge-type convexity condition. We then describe practical saddle network architectures that preserve convexity in x and concavity in y by construction. The proposed architectures require only convexity-preserving neural networks, together with simple output transformations enforcing sign and concavity constraints. Finally, we report numerical benchmarks in dimension 1 and 5, showing that the proposed saddle networks achieve high accuracy on smooth, nonsmooth, and high-rank convex--concave test functions.

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### Echoes within the Reasoning: Stealthy and Effective Watermarking via Chain of Thought

Authors: Jiacheng Lu, Yiming Li, Tao Song, Weijian Wang, Wenjie Qu, Haibing Guan, Jiaheng Zhang
Published: 2026-05-27
Categories: cs.CR, cs.LG
arXiv: https://arxiv.org/abs/2605.28890v1

Large Language Models with Chain-of-Thought reasoning capabilities represent valuable intellectual property, yet existing black-box watermarking methods often trade robustness for reasoning fidelity by perturbing final answers or relying on fragile trigger patterns. We propose BiCoT, a watermarking framework that embeds ownership signals into the internal geometry of reasoning traces by aligning high-saliency structural anchors with a private signature subspace while regularizing ordinary control tokens to preserve semantic capacity. This design couples the watermark with reasoning-relevant representations, making removal difficult without disrupting the features that support coherent reasoning. To enable verification under model theft and representation drift, we introduce Robust Subspace Registration (RSR), a Top- logprob-based black-box verifier that uses sentinel tokens to calibrate systematic shifts in the output distribution. Experiments show that BiCoT preserves reasoning fidelity across diverse complex reasoning tasks while achieving robust detection under fine-tuning, quantization, model-level perturbations, and adaptive output-level attacks across in-domain and out-of-distribution settings.

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### Context Distillation as Latent Memory Management

Authors: Ziyang Zheng, Zeju Li, Xiangyu Wen, Jianyuan Zhong, Junhua Huang, Lei Chen, Mingxuan Yuan, Qiang Xu
Published: 2026-05-27
Categories: cs.LG, cs.AI
arXiv: https://arxiv.org/abs/2605.28889v1

Context distillation compresses contextual information into model parameters, yet existing methods often ignore how multiple distilled latent memories should be stored, retrieved, and safely activated in non-oracle settings. We formulate context distillation as a latent memory management problem. We distill each context into an independent LoRA adapter, forming a modular memory bank that enables explicit memory selection. Given a query, our framework retrieves candidate memories, routes the query to the most suitable adapter, and uses a Self-Gating mechanism to decide whether latent memory should be activated. To improve efficiency, we further introduce cache sharing to reduce management overhead during inference. Experiments show that our method substantially outperforms baselines with retrieval, while Self-Gating improves robustness by deactivate unnecessary latent memories.

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### Generative Spatiotemporal Intent Sequence Recommendation via Implicit Reasoning in Amap

Authors: Sicong Wang, Ruiting Dong, Yue Liu, Bowen Zheng, Jun Meng, Jie Li, Shuaijun Guo, Yu Gu, Fanyi Di, Xin Li
Published: 2026-05-27
Categories: cs.IR, cs.LG
arXiv: https://arxiv.org/abs/2605.28888v1

Real-world user behavior rarely consists of isolated actions; instead, it often forms intent flows governed by spatiotemporal dependencies. To provide integrated service recommendations, we focus on the task of Generative Spatiotemporal Intent Sequence Recommendation (GSISR), which aims to generate intent sequences that are logically coherent and physically executable within complex spatiotemporal contexts. While LLMs offer strong reasoning potential for GSISR, direct industrial deployment is limited by high inference latency and context-mismatched or physically infeasible plans. To address these challenges, we propose a generative framework, GPlan, that internalizes LLM reasoning into lightweight models through two components. First, to enable reasoning under strict latency constraints, we introduce Progressive Implicit CoT Distillation, which compresses explicit reasoning processes into reserved latent tokens, allowing small models to inherit complex planning logic without generating long reasoning text. Second, to address the disconnect between general knowledge and real-world constraints, we design Spatiotemporal Counterfactual DPO. By aligning the model with counterfactual context-plan pairs, we improve sensitivity to spatiotemporal context and reduce context-mismatched plans. Offline experiments and online A/B testing demonstrate that our approach improves sequence coherence and context responsiveness. Our implementation and the anonymized GSISR dataset are available at https://github.com/alibaba/GPlan.

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### Computational Modeling of Antibody-Antigen Complexes: PLM-Based and MSA-Based Approaches

Authors: Xiao Luo
Published: 2026-05-27
Categories: q-bio.QM, cs.LG
arXiv: https://arxiv.org/abs/2605.28886v1

Antibodies play a central role in the immune response by specifically recognizing and neutralizing antigens, and therapeutic antibodies have become major drugs for cancer and autoimmune diseases. However, their discovery still relies on extensive in vitro screening, and accurate computational modeling of antibody structures and antibody-antigen interactions can prioritize candidates, reduce experimental burden, and accelerate rational design. Despite recent advances in high-accuracy protein and complex prediction, a persistent performance gap remains for antibody-related tasks compared with general protein-protein interactions, limiting downstream design. This thesis investigates why antibody-related tasks are harder and proposes improvements along two complementary directions. First, we investigate protein language model (PLM)-based methods for antibody and antibody-antigen structure prediction. Using embeddings from multiple PLMs, our approach achieves the best CDR-H3 accuracy among compared PLM-based methods on antibody monomer prediction. Extending it to complex prediction does not generalize: without co-evolutionary signals between antibody and antigen, single-sequence PLM representations do not reliably identify binding interfaces. Second, we develop two MSA-based interventions for antibody-antigen complex prediction: MSA refinement, which combines CDR-focused filtering with depth recovery from a larger sequence database, and convergence-aware recycling, which selects a stable intermediate recycle state for final diffusion sampling. Together, these interventions provide consistent gains over the AlphaFold3 baseline on a held-out antibody-antigen test set. Because the methods modify MSA construction and recycling behavior rather than model parameters, they apply without retraining or weight access.

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### From Pixels to Words -- Towards Native One-Vision Models at Scale

Authors: Haiwen Diao, Jiahao Wang, Penghao Wu, Yuhao Dong, Yuwei Niu, Yue Zhu, Zhongang Cai, Weichen Fan, Linjun Dai, Silei Wu, Xuanyu Zheng, Mingxuan Li et al.
Published: 2026-05-27
Categories: cs.CV
arXiv: https://arxiv.org/abs/2605.28820v1

Current vision-language models (VLMs) typically stitch together separate image encoders and language decoders via multi-stage alignment, a modular framework that inevitably fragments pixel-level signals across frames and scatters early pixel-word interactions. In parallel, native VLMs, despite impressive performance on single images, remain largely unexplored in multi-image, video understanding, and spatial intelligence. Hence, we introduce NEO-ov, a native foundation model that learns cross-frame and pixel-word correspondence end-to-end, without any external encoders, auxiliary adapters, or post-hoc fusion. By eliminating module boundaries entirely, NEO-ov enables fine-grained and unified spatiotemporal modeling to emerge natively inside the model. Notably, NEO-ov largely narrows the gap to modular counterparts while excelling at fine-grained visual perception, validating that native "one-vision" architectures are not only feasible but competitive at scale. Beyond empirical performance, we unveil systematic architectural analyses and detailed training recipes to facilitate subsequent native multimodal modeling. Our code and models are publicly available at: https://github.com/EvolvingLMMs-Lab/NEO.

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### PEFT-Arena: Understanding Parameter-Efficient Finetuning from a Stability-Plasticity Perspective

Authors: Yangyi Huang, Ruotian Peng, Zeju Qiu, Jiale Kang, Yandong Wen, Bernhard Schölkopf, Weiyang Liu
Published: 2026-05-27
Categories: cs.LG, cs.CL
arXiv: https://arxiv.org/abs/2605.28819v1

Parameter-efficient finetuning (PEFT) has become the standard approach for adapting large language models, yet evaluations largely emphasize downstream accuracy while overlooking the retention of pretrained capabilities. We argue that PEFT should be assessed through the stability-plasticity dilemma: the trade-off between target-task adaptation and resistance to forgetting. We introduce PEFT-Arena, a benchmark that jointly measures downstream performance and general capability retention. Across methods, we find distinct stability-plasticity profiles; under comparable parameter budgets, orthogonal finetuning achieves the most favorable Pareto frontier. To explain these differences, we analyze PEFT updates from two geometric perspectives. In weight space, spectral analysis reveals how parameterizations interact with the pretrained singular-value structure. In activation space, retention metrics show whether finetuning preserves or distorts general-capability representations, with forgetting linked to non-isometric representation distortion. Finally, an analysis shows that final SFT checkpoints often overshoot a better target-retention operating point. Inspired by this, we present case studies of a post-hoc improvement with path-wise rewinding.

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### Do VLMs Align Better with Humans than LLMs during Natural Reading?

Authors: Jinzhou Wu, Zhengwu Ma, Jixing Li, Baoping Tang, Zitong Lu
Published: 2026-05-27
Categories: cs.CL, q-bio.NC
arXiv: https://arxiv.org/abs/2605.28818v2

Large language models have become increasingly useful computational models of human language processing, but it remains open whether vision-language learning makes text representations more human-like during natural reading. We address this question by comparing matched LLM and vision-language model pairs under strictly text-only input and evaluating alignment with human brain activity (whole-cortex fMRI) and human behavior (synchronized regressive saccades). We identify a selective, rather than global, effect of vision-language training on human-model alignment. In the two within-lineage model pairs, VLMs more accurately predicted human regressive saccades, whereas VLMs and LLMs showed comparable whole-cortex fMRI alignment. However, sentence-level analyses revealed that the VLM advantage in fMRI alignment increased with the visual evocative strength of the sentences. Together, these findings provide a controlled in-silico comparison of multimodal training histories, showing that vision-language pretraining selectively improves model-human alignment via reading behavior and visually grounded content.

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