# Research Papers — 2026-09 · bundle page 188 of 266

> Full-text markdown of papers #9351–9400 of 13298 published in 2026-09, newest first. AI-readable mirrors of the full 13298-paper 2026-09 archive (50 papers per file).

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### SynthSentry: Detecting Synthetic Data Contamination in Language Model Training Data

Authors: Praveen Kumar Myakala, Ravichandra Namburi, Sowmya Keragodu Jayaramu, Sooraj George Thomas
Published: 2026-09-11
Categories: cs.CL
arXiv: https://arxiv.org/abs/2609.12353v1

Large language models trained recursively on their own or other models' outputs undergo model collapse, in which distributional tails and factual accuracy deteriorate while fluency survives. Prior work diagnoses collapse after training; the actionable problem is screening a corpus of unknown provenance before training. We introduce SynthSentry, a corpus-level, model-agnostic contamination signal requiring no access to the generating model, no generation history, and no synthetic labels. The score is a distributional divergence over three statistics: lexical diversity collapse, n-gram tail truncation, and perplexity variance across reference models. We evaluate on corpora contaminated by small open-weight generators and an instruction-tuned open-weight model under a leave-one-generator-out protocol. A domain-stratified study measures false positives on naturally repetitive human text (legal, clinical, source code). The score ranks corpora by severity with little loss when whole generator families are held out. Per-domain calibration holds near its nominal false-positive budget once covariance shrinkage and a bootstrap threshold replace a naive quantile, which runs four times over budget. A downstream fine-tuning check showed no contamination-driven accuracy deficit at our scale, so whether pruning recovers one remains open; the same run shows over-pruning risk once pruning exceeds the true contamination fraction. We frame screening as a data-curation defense rather than a post-hoc diagnosis and release the scoring toolkit. All results are small-scale; scope is English-language, batch-mode corpus screening. Contamination sources are single-generation or hand-authored rather than recursively generated, so results speak to synthetic contamination generally and not to recursion depth.

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### EgoMaize: A First-Person Maize Instance Segmentation Benchmark under Severe Field Occlusion

Authors: Jiayi Li, Zihan Zhang, Erhankang Yan, Yitian Chen, Yuze Li, Chengzhang Ding, Jianxin Cao
Published: 2026-09-11
Categories: cs.CV
arXiv: https://arxiv.org/abs/2609.12350v1

Close-range first-person field images are important for mobile maize phenotyping because many plant-level traits depend on in-canopy structures that are difficult to ob serve from overhead views. However, post-seedling maize fields create a difficult in stance segmentation setting: stems, leaves, tassels, and neighboring plants are elon gated, repetitive, and strongly occluded. We introduce EgoMaize, a compact benchmark for first-person maize instance segmentation, where the task is to predict ownership consistent plant masks and plant-owned stem/tassel cues from close-range field images with severe same-class overlap. Existing visible-only labels can fragment one physi cal plant into disconnected supervision, while full-amodal labels may require unverifi able completion behind neighboring plants or field objects. EgoMaize therefore uses an evidence-closed annotation workflow for occluded maize regions and assigns unreli able maize regions to ignore rather than background. Baseline results show that pre trained query-based grouping, boundary refinement, and high-resolution crop refine ment help different aspects of the task, but no architecture solves the coupled chal lenges of fine structure recovery, same-class instance ownership, and occlusion reason ing; occlusion-level analysis further shows that performance decreases as plant visi bility becomes more limited. The dataset and code are publicly available at https: //github.com/JaaaaaaaD/EgoMaize.

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### ParaRecover: A Process-Level Benchmark for Error Localization and Recovery in Parallel Tool-Use Agents

Authors: Bowen Guan, Zhentao Yin, Yanming Shen
Published: 2026-09-11
Categories: cs.LG, cs.SE
arXiv: https://arxiv.org/abs/2609.12345v1

Existing agent benchmarks mainly evaluate final task success or tool-call correctness, providing limited insight into whether agents can reliably diagnose and recover from intermediate execution failures. This limitation becomes particularly critical in multi-turn parallel tool-use scenarios, where errors may propagate across dependent branches and trigger cascading failures. We introduce ParaRecover, a process-level benchmark for evaluating error localization and recovery in multi-turn parallel tool-use agents. Built upon a fine-grained taxonomy of 14 error types covering planning dependencies, tool selection, and argument matching, the benchmark comprises 10,626 instances spanning two difficulty levels. To enable finegrained, process-oriented evaluation, we further propose the SDE rubric, which measures structural integrity, diagnostic reasoning, and evolutionary strategy during agent execution.Experiments across more than ten mainstream LLMs reveal that even state-of-the-art models still struggle with multi-turn error propagation,implicit tool-use failures, and precise replanning. Moreover, we demonstrate that the SDE rubric provides effective supervision signals for improving agents' reflective recovery capabilities. Our data and code are available at https://github.com/gbw206/ParaRecover.

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### VS-Splat: Voxel-Selective feed-forward Gaussian Splatting for end-to-end 3D object reconstruction from sparse-views

Authors: Yunsu Jeong, Hyuk Heo, Youngsang Kwak, Jaehwa Kwak, Il Yong Chun
Published: 2026-09-11
Categories: cs.CV
arXiv: https://arxiv.org/abs/2609.12343v1

Feed-forward Gaussian splatting models have demonstrated remarkable effectiveness in reconstructing three-dimensional (3D) objects from a few two-dimensional (2D) images, even if they are unseen. As existing methods typically predict Gaussian primitives uniformly across the 3D space, most primitives are placed in non-object regions. This may hinder the representation of fine object details. This paper proposes a Voxel-Selective Gaussian Splatting model (VS-Splat), a new end-to-endfeed-forward Gaussian splatting framework that predicts many primitives only within selected voxels that are likely to belong to an object, without 3D structural supervision. To achieve this, we propose a new learnable voxel selection approach that identifies object-centric voxels only with 2D rendering supervision. Our sparse-view rendering experiments with three benchmark datasets show that proposed VS-Splat outperforms several state-of-the-art methods. We further demonstrate its effectiveness as a backbone for an existing densification method and show that anoptional extension improves its robustness to inaccurate camera pose estimates.

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### UniMo: Unifying Human and Animal Motion Generation

Authors: Zeyu Zhang, Zhiyuan Zhang, Siheng Wang, Yiran Wang, Danning Li, Ian Reid, Richard Hartley
Published: 2026-09-11
Categories: cs.CV, cs.GR
arXiv: https://arxiv.org/abs/2609.12342v1

The conditional generation of 3D motion has emerged as a key research topic due to its wide applicability across robotics, AR/VR, gaming, and content creation. However, extending recent advances in text-driven human motion generation to the animal domain remains challenging due to two core limitations. First, animals exhibit highly diverse skeletal topologies, unlike the standard human structure, making unified modeling across species difficult and leading to inefficient per-species models. Second, existing animal motion datasets suffer from limited scale and annotation quality, constraining model performance. To address these challenges, we propose UniMo, a unified point cloud-based motion generation framework that bypasses topological discrepancies by converting parametric skeletons into unparametric representations, further enhanced by dynamic sampling that allocates more points to active joints. Additionally, we present UniML3D, a large-scale motion-language dataset spanning both human and animal categories, containing 145,907 motion sequences and 433,388 captions-over 102x larger than existing animal datasets. Our method achieves state-of-the-art results on UniML3D and three public benchmarks including HumanML3D, KIT-ML, and AnimalML3D, demonstrating the feasibility and effectiveness of unified human-animal motion generation. Website: https://steve-zeyu-zhang.github.io/UniMo.

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### I Am No One: Style-Aware Paraphrasing for Text Anonymization

Authors: Ahmed Sohair Khan, Estrid He, Monica Wachowicz, Elham Naghizade
Published: 2026-09-11
Categories: cs.CL, cs.CR
arXiv: https://arxiv.org/abs/2609.12341v1

Authorship attribution models can re-identify users from seemingly anonymized text by exploiting stable stylistic fingerprints, even after explicit identifiers are removed, posing a growing privacy risk for text publishing and analytics. This risk extends to speech-derived text such as ASR transcripts of meetings and call-center conversations, where stylometric leakage can persist even after acoustic anonymization. Differential privacy-based anonymization often severely degrades text quality and utility. We propose a style-aware, prompt-driven anonymization approach that uses pretrained large language models to construct compact stylistic profiles from minimal samples and rewrite text to suppress identifiable style markers while preserving meaning. Across blog and review datasets, our approach reduces authorship attribution F1 by 60-70% while maintaining content quality and readability, substantially outperforming DP-based and non-DP baselines.

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### Theoretical Guarantees for One-Shot Magnitude Pruning and Compute-Adaptive Early Exit

Authors: Erdem Koyuncu
Published: 2026-09-11
Categories: cs.LG
arXiv: https://arxiv.org/abs/2609.12337v1

We study compute reduction in neural networks through a unified partial versus full computation view, captured by one-shot magnitude pruning in the static regime and early exit in the adaptive regime. In an asymptotic single-neuron model, we prove a concentration theorem for one-shot magnitude pruning with explicit rates. We also introduce the conditional perceptron for early exit and show that its excess generalization error decays as a power of the compute gap, with an exponent that grows to infinity as the alignment between partial and full computations tends to one. We then extend the analysis to deep networks, characterizing how pruning-induced distortions accumulate with depth and deriving a corresponding compute-accuracy tradeoff for frozen-backbone early exit under a neural network Gaussian process model. Numerical simulations corroborate the predicted scaling laws.

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### Simulating Disengaged Students to Evaluate LLM-based Tutors

Authors: Xianghui Meng, Jionghao Lin
Published: 2026-09-11
Categories: cs.LG
arXiv: https://arxiv.org/abs/2609.12331v1

Simulated students generated by computational models provide a practical way to evaluate tutoring strategies and pedagogical approaches used by human and AI tutors. However, such simulations should account for disengaged behaviors, including gaming the system, wheel-spinning, and off-task behavior, because tutors may need different responses for different learner states. We present Disengagement-Aware Student Simulators (DAS2), a reproducible pre-deployment protocol that models five learner-engagement states: engaged, gaming, wheel-spinning, off-task, and mixed, and evaluates AI tutor performance across these states. Using ASSISTments09, two coders independently labeled 100 sampled tutoring sessions based on anonymized interaction-log summaries. They achieved 84% agreement (Cohen's kappa = 0.78), and among agreed cases, human consensus labels matched DAS2 rule-based labels in 81% of cases (kappa = 0.75). Conditioning simulations on intended learner states reduced the correctness-rate gap between simulated and authentic sessions from 0.54 to 0.20 for gaming and from 0.51 to 0.18 for wheel-spinning. Fine-tuned Qwen2.5-7B better matched authentic response-time distributions, while prompt-only GPT-4o generated more distinguishable learner states. Evaluation of five AI tutors from the Claude, Llama, Gemini, Qwen, and GPT families showed that relative rankings remained stable across learner states and interaction lengths, while absolute performance varied, revealing state-specific differences in tutor support. Human validation further showed that automated tutor evaluation does not fully align with human judgment. DAS2 provides a pre-deployment framework for evaluating how AI tutors respond to diverse learner-engagement states before deployment.

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### LoRA-RC: Reservoir Computing with Low-Rank Adaptation

Authors: Wenbin Wan
Published: 2026-09-11
Categories: cs.AI, cs.LG, eess.SY, math.DS
arXiv: https://arxiv.org/abs/2609.12327v1

Reservoir computing (RC) trains only a linear readout over a fixed recurrent layer, making it fast and data-efficient for online prediction. However, a static reservoir degrades under system drift, readout-only adaptation is then insufficient, and unconstrained reservoir adaptation can destroy the echo-state and incremental stability properties that make RC reliable. This paper proposes LoRA-RC, which adapts the recurrent matrix through a low-rank correction driven by streaming prediction errors. The base reservoir and adaptation bases are fixed offline; a small core matrix is adapted online, projected onto a spectral-norm ball, and low-pass filtered at each step. The projection guarantees that every applied recurrent matrix remains within a certified contraction set, and an incremental input-to-state stability bound is established for the reservoir along each online adaptation path, with path-independent rate and gain. On a Lorenz system with an abrupt parameter drift, LoRA-RC cuts post-drift prediction error by 56% versus a fixed RC and 51% versus readout-only adaptation; ablations over 20 seeds show that removing the projection inflates this error by more than a factor of 40.

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### Affective Agent: On-Device Personalized Intervention Reasoning for Wearable Systems

Authors: Reina Mun, Zishen Wan, Vijay Janapa Reddi
Published: 2026-09-11
Categories: cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.12322v1

Affective computing has advanced wearable state inference, but on-device reasoning about whether, when, and how to intervene remains challenging. We present Affective Agent, a three-layer reference architecture for personalized intervention reasoning under uncertainty on wearable-class hardware. It combines a compact sub-billion-parameter language model with physiological evidence, context, and user history to decide whether, when, and how to intervene, without cloud dependency or per-user retraining. The architecture is organized into three interacting layers (perception, personalization, and reasoning), adapting to individual users through host-managed structured memory evolution rather than per-user weight updates. We instantiate Affective Agent in indoor environmental quality control and evaluate it on held-out, simulator-generated longitudinal scenarios spanning physiological variation, context, signal quality, and intervention history. Results show that memory-driven personalization and two-pass structured reasoning improve intervention decisions within this synthetic evaluation. By moving the decision layer on-device, this work demonstrates a path from wearable state inference toward closed-loop, personalized intervention on wearable-class hardware.

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### AIM: A Privacy-Aware Interoperable Memory Framework for Multi-Agent Multi-User LLM Systems

Authors: Zachary Johnson, Nigel Boachie Kumankumah, Somya Chatterjee, Tejas Sathyamurthi, Min Chen, Xinyi Alice Li, Xiao Wang, Emily Morgan Gelchie, Jessica Lin, Sadid A. Hasan, Sulaiman Vesal
Published: 2026-09-11
Categories: cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.12320v1

Traditional large language models (LLMs) are scoped to individual user sessions, limiting their knowledge to a single conversation and preventing them from learning user preferences that evolve over time. Existing agentic memory systems address this limitation but generally operate at the individual-user level, restricting the public knowledge that could be shared across users to improve downstream responses. We introduce AIM (Agentic Interoperable Memory), a unified, privacy-aware memory framework that enables multi-agent, multi-user LLM systems to persistently manage private and shared memory. AIM dynamically classifies information as private, scoped to one user and inaccessible to others, or public, accessible to all users. It enforces index-level access controls so that private memories are retrievable only by their owner, protecting sensitive data while allowing beneficial shared knowledge to improve coordination and consistency. We also introduce MUMBench (Multi-User Memory Benchmark), a dataset of multi-user interactions containing private and shareable information across four domains. To our knowledge, MUMBench is the first public dataset designed to evaluate multiple memory operations, including retrieval, creation, update, and deletion, in a multi-user environment. Across three independent runs on MUMBench, AIM achieves 96.0% visibility classification accuracy, 58.8% strict operation accuracy, and 70.5% state-aware operation accuracy.

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### Sampling via Decision-Flow: Training-Free Extraction of Improved Latent Reasoning Paths in Large Language Models

Authors: Zhendong Mi, Shaoyi Huang
Published: 2026-09-11
Categories: cs.LG
arXiv: https://arxiv.org/abs/2609.12317v1

A central question in LLM reasoning is whether reinforcement learning (RL) instills genuinely new capabilities or merely reshapes how existing knowledge is expressed during inference. Building on the distribution-sharpening hypothesis, which holds that RL reallocates probability mass toward high-reward trajectories already latent in base models, we ask: can we unlock those latent paths without costly RL fine-tuning? We present Decision-Flow Sampling (DF-Sample), a training-free, data-free inference-time framework that constructs a hierarchical reasoning tree, scores terminal nodes for quality, and back-propagates utilities to inform each intermediate branching decision. Unlike conventional sampling strategies that make purely local step-wise choices, DF-Sample performs explicit global trajectory evaluation before committing to a path, recovering high-quality but low-probability reasoning chains that standard decoding overlooks. On GPQA, DF-Sample achieves 45.6% accuracy, surpassing power sampling (38.9%) and GRPO (39.9%), showing that a training-free method can outperform a trained one. Across three models and four benchmarks, DF-Sample consistently outperforms baselines, indicating substantial latent reasoning potential in pretrained base models.

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### Do Influence-Derived Data Perturbations Enable Machine Unlearning? A Controlled Study of Three Plausible Roles

Authors: Chenkai Wu, Chrispine Kambimbi, Qinyang Zeng, Jun Yan
Published: 2026-09-11
Categories: cs.AI
arXiv: https://arxiv.org/abs/2609.12313v1

We evaluate Deep Perturbation Learning (DPL), which perturbs training images and labels along influence-derived directions, in three roles in which prior work has positioned it for machine unlearning: a direct deletion signal (the strongest claim), a utility-preserving regularizer, and a warm start for adversarial unlearning. Evidence for the weaker roles has been used to support the stronger one, so we test each role separately under a matched protocol with exact-seed retraining baselines. An audit of the public implementation identifies two correctness issues: image directions are computed on augmented, normalized tensors but applied to raw images, and the label perturbation falls below float32 resolution, leaving labels unchanged. After correcting the image-perturbation pipeline, DPL fails the direct-deletion criterion on CIFAR-10/ResNet-18 in all three paired seeds. Its utility effects are inconsistent in sign across seeds, and once direction-computation time is counted it underperforms simple warm-start baselines. A one-seed Tiny ImageNet check likewise does not favor DPL as a regularizer or warm start; preprocessing inconsistencies in the released code make the direct comparison there inconclusive. These results cover random instance deletion only and do not rule out influence-based methods in other deletion regimes. We release a role-matched evaluation protocol and an audit checklist for perturbation-based deletion claims.

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### ESTS at WMT26: Routing-Informed Expert Pruning for Model Compression

Authors: Liu O. Martin, Lucas Bandarkar, Nanyun Peng
Published: 2026-09-11
Categories: cs.CL, cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.12310v1

We describe six submissions under the team name ESTS to the unconstrained WMT26 Model Compression Shared Task for English--Simplified Chinese and English--Egyptian Arabic. We submit three compression operating points per translation direction, all derived from GPT-OSS-20B. We use task-specific routing mass to rank experts and cross-lingual routing divergence to allocate retained capacity across layers, then physically remove low-importance experts. The resulting specialists are recovery-tuned on GPT-5.1-generated synthetic translation data and further compressed by applying MXFP4 quantization to the retained expert projection weights. We additionally implement a robust inference system for the instruction-conditioned WMT26 setting, including category inference, output validation, retries, segmented fallback, and source-owned JSON reconstruction. Across our six submissions, parameter counts range from 4.186B to 7.770B and packed artifact sizes from 4.55 to 6.33~GiB. Internal xCOMET-XL evaluation using GPT-5.1 pseudo-references provides an internal comparison across the submitted compression operating points.

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### Self-Verifying Anomaly Detection using Explainable AI for Cybersecurity of DER Networks

Authors: Damilola Popoola, Souradeep Bhattacharya, Manimaran Govindarasu
Published: 2026-09-11
Categories: cs.CR, cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.12305v1

The rapid growth of Distributed Energy Resources (DERs) has significantly expanded the cyber attack surface of modern power grids. Furthermore, increasing sophistication in attack techniques demands anomaly detection systems (ADS) that are accurate, interpretable, and reliable to support DER cybersecurity. While ML-based ADS provide strong detection capabilities, their black-box nature reduces operator trust and limits Security Operation Center's (SOC) ability to effectively interpret alerts and respond, highlighting the need for explainable Artificial Intelligence (XAI) to ensure transparency and operational confidence. This paper presents an XAI-based anomaly detection framework tailored for DER networks (ExCYDER). The proposed framework uses a self-verifying mechanism that validates ADS alerts to ensure trustworthy decision-making. ExCYDER combines LightGBM with SHAP to check whether each model decision aligns with its feature-attribution evidence, allowing the system to confirm that its internal reasoning is consistent and reliable. Experiments on a realistic DNP3 dataset achieved over 98% detection accuracy, an average rule--SHAP consistency of 44.6%, a SHAP latency of 14.5 ms per alert, and a confidence deviation within 5%, demonstrating stable verification behavior with minimal computational overhead. The framework distinguished between coherent and inconsistent alerts without compromising detection accuracy, demonstrating that integrated verification within XAI-based ADS enhances interpretability, auditability, and operational robustness for DER-focused SOCs.

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### Hybrid Physics-AI Framework of Body Center of Mass Dynamics from Wrist-Worn Sensors

Authors: Shuhao Que, Valentina Breschi, Ying Wang
Published: 2026-09-11
Categories: cs.AI, eess.SP
arXiv: https://arxiv.org/abs/2609.12304v1

Wrist-worn IMU has been widely used for daily-life health monitoring. Yet, it does not fully represent whole-body dynamics, for which the body center of mass (COM) is considered the physiological reference standard. Therefore, this work proposes a simplified kinematic model (KM), which is designed to map the wrist IMU to the COM acceleration. It is built upon several reductive assumptions that enable the solvability of the dynamic equations based on wrist IMU measurements alone. This work further proposes three types of hybrid AI modeling methods, namely human kinematic model-based neural network (HKM-NN) models, to leverage the power of both grey-box and black-box modeling. The HKM-NN methods include serial learning (ser-) and two approaches of simultaneous learning (sim1- and sim2-). The proposed models are trained and tested using our dataset, which includes wrist IMU measurements and ground-truth COM measurements from 10 healthy volunteers during six gait activities and sit-to-stand (SS) transitional movement. The results demonstrate the feasibility of estimating COM acceleration from wrist IMU measurements. Our KM model yields satisfactory results, with an error ranging from 6.7% to 12.5% for gait activities and 5.6% for the SS. In comparison with the KM model, our HKM-NN models significantly enhance the performance, achieving 5.3% to 9.3% errors for gait activities, and the best error of 3.9% for the SS. In addition, the HKM-NN models demonstrate distinct robustness characteristics under noisy test conditions, with sim1-/sim2- generally maintaining greater robustness under Gaussian perturbations, while the KM model exhibits comparatively strong robustness under salt-and-pepper noise. These findings highlight the importance of combining biomechanical structure with data-driven learning for wearable sensing applications operating under imperfect and noisy measurement conditions.

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### Breaking the Token Ceiling: Distilling Smaller, Stronger Byte Models

Authors: Kalyani Marathe, Artidoro Pagnoni, Tomasz Limisiewicz, Margaret Li, Mike Lewis, Luke Zettlemoyer, Srinivasan Iyer
Published: 2026-09-11
Categories: cs.CL, cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.12303v1

Small models are made more capable through distillation from a larger one that shares their tokenization scheme. However, do distilled byte and token models behave similarly in terms of scaling trends as compute and data increases? To enable this comparison, we introduce two variants to efficiently convert token logits to Byte Logits: 1) approximate: Marginalize-It, and 2) exact: End-Of-Token. We then present the first large scale study of overtraining decoder-only dense transformer models varying two dimensions simultaneously: the tokenization scheme (Tokens, Bytes, Bytes w/ eot) and the training objective (Distillation vs. Cross-Entropy), sweeping layer-parameter-matched models with roughly 1 billion parameters up to 1 trillion bytes of data. Across eight benchmarks spanning three categories: Multiple Choice QA, Language Generation, and Machine Translation, we find that Token-1B models outperform byte models (End-Of-Token-1B and Bytes-1B) in the low-FLOP regime but eventually plateau; byte models start worse yet surpass Token-1B models with more compute, reaching a higher downstream task performance ceiling. Extrapolating the average top-1 error vs. validation BPB scaling laws predicts that, asymptotically, distilled End-Of-Token-1B outperforms distilled Token-1B by up to 4%. They are also far more data efficient, matching the performance of distilled Token-1B using only one-sixth of the training data. Moreover, by operating over a small vocabulary of 256 bytes instead of on the order of 100K tokens, they circumvent the need for top-k truncation during logit dumping, while also reducing logit storage costs to roughly one-fifth. Finally, our downstream performance scaling laws predict that our distilled End-Of-Token-1B models asymptotically surpass the Llama 3.2-1B, Gemma-3-1B-pt, and Gemma 2B models on averaged downstream tasks by up to 6.5%, 8.1%, and 2.1%, respectively.

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### PDE-constrained inverse problems at the $\sqrt{n}$ rate via debiased physics-informed neural networks

Authors: Yves Atchade, Debarghya Mukherjee
Published: 2026-09-11
Categories: math.ST, stat.ME, stat.ML
arXiv: https://arxiv.org/abs/2609.12301v1

We study the problem of estimating unknown parameters in PDE-constrained inverse problems from noisy observations, where the PDE solution is approximated using Physics-Informed Neural Networks (PINNs). While PINNs have demonstrated remarkable empirical success, existing estimators often inherit the slow nonparametric convergence rate of the neural-network solution, leading to biased and statistically inefficient inference for the finite-dimensional parameters of interest. To address this, we propose a two-step debiased estimation procedure that combines neural-network-based nonparametric estimation with an influence-function-based bias correction. By eliminating the first-order sensitivity of the estimator to errors in the nuisance function, our procedure yields a $\sqrt{n}$-consistent and asymptotically normal estimator without requiring undersmoothing of the neural network component. We further extend this framework to Bayesian inference by replacing the original likelihood with a debiased quasi-likelihood and establish a Bernstein-von Mises theorem showing that the resulting posterior contracts at the $\sqrt{n}$-rate with an asymptotic covariance matching that of the frequentist estimator. As a by-product of our analysis, we establish near-minimax optimal convergence rates for estimating a nonparametric regression function and its derivatives in Sobolev spaces using neural networks. Extensive numerical experiments corroborate our theoretical findings and demonstrate the necessity of the proposed debiasing procedure for valid statistical inference in PDE-constrained inverse problems.

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### FRIST: FMRI Representation Informed Shared-space Training Improves EEG-only Individual-Finger BCI Decoding

Authors: Jintao Zhang, Yidan Ding, Joshua Kosnoff, Maxim Karrenbach, Hanwen Wang, Bin He
Published: 2026-09-11
Categories: cs.LG, eess.SP
arXiv: https://arxiv.org/abs/2609.12298v1

Finger-level motor decoding is important for naturalistic brain-computer interface (BCI) control, yet individual-finger decoding from scalp electroencephalography (EEG) remains challenging because finger representations are spatially close in the sensorimotor cortex and blurred by volume conduction. Leveraging the high spatial resolution of functional MRI (fMRI), we introduce fMRI Representation-Informed Shared-Space Training (FRIST), a two-stage EEG decoding framework that first learns fMRI-informed spectral projections from simultaneous EEG-fMRI recordings and then uses fMRI-derived class geometry to guide residual refinement of EEG predictions. FRIST transfers information across recordings through shared finger labels without requiring paired trials and uses only EEG at inference. We evaluated 12 able-bodied participants during movement execution (ME) and motor imagery (MI) under two-class and three-class chronological session-held-out decoding simulating the online scenario. Using EEGNet as the EEG feature extractor, FRIST increased group average accuracy from 66.93% to 74.53% for two-class ME, from 44.83% to 56.58% for three-class ME, from 80.78% to 85.63% for two-class MI, and from 60.93% to 69.90% for three-class MI compared with the EEG-only EEGNet baseline. FRIST is also shown to improve EEG-only decoding when the target participant's own fMRI data were unavailable. FRIST also generalized across multiple EEG decoding backbones, reaching 87.40% in two-class MI and 72.54% in three-class MI with EEG Conformer as the EEG feature extractor. These findings indicate that fMRI provide useful spatial constraints for EEG representation learning. FRIST improves noninvasive EEG-based finger-level BCI decoding, offering a multimodal strategy for integrating the spatial specificity of fMRI with real-time applicability of EEG.

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### FIDAL: Diversity-Aware Federated Active Learning Under Real-World Distribution Shifts

Authors: David Dueñas Gaviria, Shadi Albarqouni
Published: 2026-09-10
Categories: cs.LG, cs.CV
arXiv: https://arxiv.org/abs/2609.31637v1

Federated learning enables collaborative model training across institutions without centralizing data, yet high annotation costs, domain shifts, and class imbalance remain major obstacles, especially when irrelevant out-of-distribution (OOD) samples dilute the labeled data. Existing active learning methods target uncertainty or diversity within in-distribution (ID) data and overlook unknown samples in federated clinical settings. We propose FIDAL, an open-set federated active learning framework that combines calibrated global-local evidential uncertainty, support-set diversity weighting, and adaptive OOD rejection. The rejection gate thresholds a foundation-model Gaussian-coverage signal per client and per round with Otsu's criterion, so that highly informative ID samples are queried while irrelevant outliers are excluded without any hand-tuned threshold. Evaluated on three multi-center medical imaging benchmarks (dermatology, histopathology, and mammography with organically occurring artifacts) in realistic open-set scenarios, FIDAL outperforms detector-based open-set methods by up to about 12 percentage points of balanced accuracy and is the only method on the accuracy-ID purity Pareto front of all three benchmarks. At an equal query budget it spends at least 1.3 times fewer annotations on OOD samples than every accuracy-matched baseline, saving an estimated 7-29 hours of expert reading on the mammography benchmark. By labeling only a fraction of the data pool, it matches or exceeds fully supervised performance across modalities. These results highlight the value of integrating uncertainty, diversity, and OOD rejection in open-set federated active learning for medicine.

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### Grounding Vision-Language Models in Driving Semantics: A Multi-Dataset Predicate Framework for Explainable Reasoning

Authors: Mohamed Chouai, Fazli Faruk Okumus, Stefan Kugele
Published: 2026-09-10
Categories: cs.LG, cs.CV, cs.RO
arXiv: https://arxiv.org/abs/2609.31636v1

Vision-language models are increasingly used for driving-scene understanding, yet the semantic relations expressed in their outputs are often difficult to verify against the underlying traffic situation. This paper introduces a deterministic multi-dataset predicate framework that derives driving-scene semantics from measurable geometric, kinematic, temporal, map, and traffic-control evidence. Dataset-specific interfaces are used only to recover the required scene information, while predicate definitions remain unchanged across nuPlan and nuScenes and are materialised in a common Predicate Knowledge Graph. Quantitative semantic validation against manually annotated predicate relations on 200 scenarios from each dataset yields macro F1 scores of 0.94 on nuPlan and 0.93 on nuScenes, with an average cross-dataset difference of 0.02 across the shared predicates. The Predicate KG is further evaluated using a frozen LLaVA-OneVision-7B model on the nine NuPlanQA subtasks. Predicate grounding achieves the highest accuracy among the evaluated visual-input conditions in seven of nine NuPlanQA subtasks, including Traffic Light (53.2% to 71.5%), Situation Assessment (76.2% to 86.1%), and Action Recommendation (82.9% to 89.0%). Weather/Lighting remains essentially unchanged (89.4% vs. 88.8%), consistent with the absence of corresponding predicates, while Predicate KG only input outperforms metadata-only input in eight of nine subtasks. The results show that deterministic predicates provide a consistent and traceable semantic representation and, under oracle grounding, can reduce visual dependence for reasoning tasks covered by the predicate vocabulary.

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### What Next-Event Accuracy Cannot See: Closed-Loop Evaluation of Emergency Department Trajectory Simulators

Authors: Zhen Xuen Brandon Low
Published: 2026-09-10
Categories: cs.LG, cs.AI
arXiv: https://arxiv.org/abs/2609.31635v1

Clinical trajectory models are usually evaluated by next-event accuracy on observed histories. Simulation is different: models must condition on their own generated events, allowing errors to compound. Although this problem is well known in sequence modelling, it has not been systematically quantified for clinical trajectory simulators. We developed EDSim-Bench to evaluate this failure mode using 425,028 MIMIC-IV-ED stays, with external replication on MC-MED, and release the evaluation protocol and scoring code. Starting from held-out visit prefixes, models generate the remainder of each visit and are evaluated on termination, event composition, timing, conditional fidelity, and occupancy forecasting, with a train-only order-3 n-gram as a reference baseline. Despite next-event accuracies within 0.001, three neural architectures behaved very differently under rollout. Across seeds, one Transformer recipe ranged from 0.43 to 0.96 in termination score and from 4.2- to 137-fold the divergence of the n-gram; no prefix-trained neural model approached the n-gram on termination or event composition. Inference-time interventions improved termination but did not jointly recover composition and timing. Supervising every eligible sequence position rather than only the final prefix position was associated with one to two orders of magnitude lower divergence across Transformer, GRU, and LSTM models, with the pattern persisting under model scaling, temporal shift, and external-site evaluation. Nevertheless, even the best model generated visits approximately half as long as observed, and model rankings reversed on occupancy forecasting, a downstream quantity relevant to bed management. These results show that next-event accuracy is insufficient to evaluate clinical trajectory simulators and motivate closed-loop evaluation across seeds, rollout criteria, and downstream tasks.

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### Symmetry-quotient Flatness and Generalization

Authors: Taiki Miyagawa
Published: 2026-09-10
Categories: cs.LG, stat.ML
arXiv: https://arxiv.org/abs/2609.31634v1

This paper develops a theorem-level pipeline in symmetry-quotient settings: quotient linear stability implies quotient flatness, quotient flatness implies input smoothness, and input smoothness yields generalization under local covering assumptions. Flatness is often associated with generalization, and Stochastic Gradient Descent (SGD) is frequently viewed as implicitly biased toward flat solutions. However, standard flatness measures are typically defined in the raw parameter space and are therefore not invariant under function-preserving symmetries such as positive rescaling. We develop a symmetry-aware theory of quotient flatness, quotient linear stability, input smoothness, and generalization on quotient spaces of neural-network parameters. For square loss and models equipped with function-preserving group actions, we define quotient flatness as the trace of the Hessian of the empirical loss on the regular quotient manifold. We show that quotient flatness controls input smoothness through a quotient-space analogue of the flatness-to-smoothness argument. We also prove that one-step mean-square quotient linear stability of the linearized SGD dynamics implies an explicit quotient-flatness bound in terms of the batch size and learning rate, and extend this analysis to higher-order tensor moments. Finally, under local covering and boundedness assumptions, we derive population generalization bounds in terms of quotient flatness and, consequently, in terms of quotient linear stability.

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### Enhancing generalization in endwall film cooling prediction: Incorporating the superposition principle into transformer-based neural operators

Authors: Qineng Wang, Liming Song, Tianyuan Liu, Zhendong Guo
Published: 2026-09-10
Categories: cs.LG, physics.comp-ph, physics.flu-dyn
arXiv: https://arxiv.org/abs/2609.31633v1

In this study, a physics-enhanced neural operator framework is proposed to enhance the generalization prediction ability of the cooling layout of a turbine endwall with variable number of film holes. Specifically, inspired by the film cooling superposition principle, we propose a film cooling prediction model, namely superposition-based deep neural operator (SDNO), that divides the endwall temperature field prediction into two stages. In the first stage, the cooling layout of a turbine endwall is divided into several sub-parts with randomly assigned film holes, and a Transformer-based neural operator network, namely Calculate Net, is designed to predict the temperature field of each sub-part. Then, in the second stage, another neural operator network, i.e., Super Net, is trained to combine the temperature fields predicted by Calculate Net for each sub-part and obtain the superposed temperature field of the full cooling layout. Additionally, instead of directly taking the film cooling contours as pixel plots, a signed distance function (SDF) which is sensitive to the variable locations of cooling holes, is designed to encode the location information of cooling holes. Furthermore, the proposed endwall film cooling prediction model is trained with the samples that changing the number of film holes from 1-5 with variable locations. Then, the trained prediction shows excellent generalization prediction ability, which can accurately predict the film effectiveness of the cooling layout with 10-20 film cooling holes that are unseen in the training samples. The proposed SDNO also improves prediction accuracy relative to the fully supervised baseline. With the above, the effectiveness of our proposed prediction model has been well demonstrated.

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### EEGAgentBench: Benchmarking LLM Agents on Short- and Long-Horizon EEG Analysis

Authors: Huyu Wu, Weining Weng, Yuchen Liu, Yiqiang Chen, Yang Gu
Published: 2026-09-10
Categories: cs.LG
arXiv: https://arxiv.org/abs/2609.31632v1

Electroencephalography (EEG) analysis is evolving from short-segment classification toward long-horizon interpretation that demands iterative evidence accumulation, multi-step reasoning, and coordinated use of specialized signal-processing tools. Although large language models (LLMs) have recently shown promise as autonomous agents for EEG analysis, existing EEG agentic evaluations remain fragmented, covering limited tasks over narrow temporal horizons with inconsistent protocols, and providing no comprehensive assessment of agents' reasoning, tool-use, and workflow construction capabilities. To address this gap, we propose \textbf{EEGAgentBench}, a unified benchmark for systematically evaluating LLM agents on short- and long-horizon EEG analysis. EEGAgentBench spans six representative EEG applications ranging from knowledge question answering to sleep staging. It encompasses signal durations from 2 seconds to nearly 23 hours, with prediction targets ranging from class labels to event intervals and epoch-level sequences. This design supports unified evaluation across knowledge reasoning, short-horizon interpretation, long-horizon event detection, and sequential understanding. The benchmark further provides 10 deterministic EEG analysis tools that expose only task-relevant signal measurements. Agents must therefore select tools autonomously, accumulate evidence iteratively, and construct multi-step workflows. For evaluation, we benchmark 29 frontier LLMs from 15 model families. Results demonstrate that EEGAgentBench effectively distinguishes agent capabilities beyond model scale and inference cost, while revealing substantial limitations of current LLM agents in long-horizon EEG analysis, particularly in sustained evidence accumulation and multi-step reasoning.

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### Enabling Vision and Cross-Modal Learning for Multimodal Stroke Recurrence Prediction: An Interpretable Two-Step Framework

Authors: Christian Gapp, Elias Tappeiner, Martin Welk, Karl Fritscher, Stephanie Mangesius, Constantin Eisenschink, Philipp Deisl, Michael Knoflach, Astrid E. Grams, Elke R. Gizewski, Rainer Schubert
Published: 2026-09-10
Categories: cs.CV, cs.AI
arXiv: https://arxiv.org/abs/2609.22271v1

Multimodal stroke recurrence prediction requires effective integration of heterogeneous clinical and imaging data, yet modality imbalance often causes models to over-rely on dominant modalities and underutilize complementary information. While self-supervised pretraining and selective parameter freezing are commonly employed to improve representation learning and fine-tuning stability, their effect on modality contributions and cross-modal behavior in multimodal medical models remains largely unexplored. In this work, we investigate whether image pretraining on 3D CTA scans reduces modality imbalance and improves cross-modal integration for stroke recurrence prediction, a clinically critical task we recently addressed. To this end, two multimodal neural networks are pretrained in a self-supervised manner and subsequently fine-tuned using two distinct freezing strategies. Their performance and modality utilization are compared against both the baseline model from our previous work and models trained entirely from scratch in this study. Our results demonstrate that self-supervised pretraining enables more effective utilization of the multimodal image-tabular dataset, outperforming both the prior baseline and all non-pretrained models. Notably, the best-performing Vision Transformer based neural network successfully overcomes unimodal collapse. Synergy analysis reveals significant interactions between vision and both gender and CHD, suggesting clinically relevant patterns for stroke recurrence. Overall, our findings demonstrate that self-supervised pretraining and strategic fine-tuning support more balanced modality utilization and enable meaningful cross-modal interactions. Code is publicly available at https://github.com/ChristianGappGit/SSL_Pretraining.

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### Molecular representation shapes the balance between target fidelity and exploration in flow based polymer generation

Authors: Tianren Zhang
Published: 2026-09-10
Categories: physics.chem-ph, cond-mat.mtrl-sci, cs.LG
arXiv: https://arxiv.org/abs/2609.16028v1

Designing polymers with targeted properties requires navigating vast chemical spaces from limited labeled data. Here we introduce PolyLatentFlow, a framework based on continuous-time flow matching in latent space for unconditional and conditional polymer generation, together with LlamaUni, a multimodal representation combining polymer sequence and 3D structural information. In unconditional generation, PolyLatentFlow with LlamaUni produced the largest yield of valid candidates novel relative to PolyInfo among the evaluated unconditional generators while maintaining high diversity. For $T_g$ conditioning, generated property distributions shifted systematically across a 200 °C target range. In multi-property tasks, molecular representations showed similar surrogate target fidelity but differed markedly in validity, training-set replay, and structural proximity to labeled polymers. PolyLatentFlow with LlamaUni consistently combined high validity with low replay and achieved the largest per-attempt yield of nonreplayed target hits for CO$_2$/N$_2$ conditioning. These results demonstrate latent space flow matching for polymer inverse design and identify molecular representation as a key determinant of target control and exploration beyond labeled chemistry.

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### 3D Field Data Reduction with Adaptive Sample-Based Gaussian-Encoded Reconstruction

Authors: Michael R. Martin, Joseph Insley, Victor A. Mateevitsi, Silvio Rizzi, Kwan-Liu Ma
Published: 2026-09-10
Categories: cs.GR, cs.CE, cs.CV, cs.LG
arXiv: https://arxiv.org/abs/2609.16024v1

In scientific simulation, regular grids, unstructured meshes, and particle-based formats are chosen to represent field data for computational efficiency, geometry/adaptive flexibility, and following motion/deformation, respectively. Each of these field data formats is often handled through separate data-specific processing pipelines. We present a unified sample-based Gaussian encoding method that represents these data forms under a single fixed-budget formulation. The method initializes and refines Gaussian primitives directly from the input samples while preserving a prescribed primitive count and encoded size to achieve a desired level of data reduction. Across structured, unstructured, and particle data, the sample-based formulation improves reconstruction accuracy with measurably fewer primitives in comparison to prior formulations, achieving up to 4.8 dB higher PSNR with an approximate 44x reduction in primitive count. For time-varying data, warm-starting from the previous timestep reduces the optimization required to reach independently trained reconstruction quality. Together, these results demonstrate a unified fixed-budget Gaussian encoding framework for structured, particle, unstructured, and time-varying scientific data with predictable storage, higher reconstruction accuracy, and improved temporal encoding efficiency.

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### Are We Grading Properly? Understanding Failure Modes in Medical Benchmarks

Authors: Prithvi Dixit, Pedram Hosseini
Published: 2026-09-10
Categories: cs.CL, cs.LG
arXiv: https://arxiv.org/abs/2609.16023v1

Medical evaluation is shifting from static option-based questioning to realistic clinical scenarios with open-ended output modes. Grading these at scale naively, however, is expensive, and rubric-based evaluation has become the dominant scalable alternative. We ask what happens when the rubrics themselves are not airtight, and whether such flaws can be detected and corrected. We apply RIFT, a global rubric failure taxonomy, to two clinical benchmarks (HealthBench Professional and LiveMedBench), and find failure modes are meaningful: on HealthBench Professional an LLM judge flags 29.6% of criteria as non-atomic and 65.4% as misaligned/rigid. Then, we show that these flaws are meaningful and not simply cosmetic. As an example, rewriting bundled criteria of the form "at least one of / all of the following" as equally weighted children and regrading identical responses shifts scores by up to 15.9 percentage points on affected conversations, with disjunctive bundles inflating scores and conjunctive bundles deflating them. We also find that RIFT generally under-detects bundling on clinical rubrics, flagging 3.3% of LiveMedBench criteria as non-atomic where surface-form analysis finds structure in 25.8%.

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### Decoupling Error Attribution in Cloud-Native Graph-RAG: A Data Integrity Diagnostic Framework

Authors: Shuai Yan, Yuhang Wu, Xiaodong Huang, Ke Wang
Published: 2026-09-10
Categories: cs.IR, cs.AI
arXiv: https://arxiv.org/abs/2609.13324v1

Graph-RAG systems often assume pristine data quality, overlooking the severe impact of perturbations in cloud-native databases. This paper proposes a three-layer decoupled diagnostic framework to orthogonally attribute system errors to reasoning loss, Knowledge Graph (KG) defects, and Cypher generation errors. Evaluated on a spatio-temporal ecological KG of the Southeastern Tibet region with eight defect types, results reveal that data integrity, rather than algorithmic reasoning, is the dominant performance bottleneck, with structural defects degrading system accuracy from 0.93 to 0.39. Crucially, we observe a masking-like phenomenon termed the Parametric Knowledge Masking Effect (PKME), suggesting LLMs compensate for broken retrieval paths using internal memory. This shrinks apparent query generation errors by over 70 percent, obscuring actual storage deterioration and increasing the risk of false negatives for automated monitoring. This work provides a quantitative foundation for auditing and optimizing data integrity in cloud-based information fusion systems.

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### Attention-DP3: Spatially Object-aware 3D Diffusion Policy via Geometry-aligned Attentional Conditioning

Authors: Changbo Yan, Zhongbo Zhang, Zaibin Zhang, Yifan Wang, Lijun Wang, Huchuan Lu
Published: 2026-09-10
Categories: cs.RO, cs.CV
arXiv: https://arxiv.org/abs/2609.13318v1

3D point-cloud observations are inherently ambiguous in complex, cluttered manipulation scenes, where target objects may be partially occluded or tightly intermingled with visually similar distractors. As a result, standard 3D diffusion policies often struggle to localize and exploit task-relevant geometry as scene complexity grows. We propose \textbf{Attention-DP3}, a spatially object-aware 3D diffusion policy that injects object-level geometric cues via attention while keeping the DP3 diffusion backbone unchanged. Our pipeline performs open-vocabulary 2D segmentation on RGB images, then lifts predicted target masks into 3D using calibrated camera geometry to obtain object-centric geometric priors. We incorporate these cues through Tri-field Attentional Conditioning, which constructs three complementary fields: (i) a targetness field to anchor the target object, (ii) an intra-target saliency field to emphasize task-relevant geometry within the target, and (iii) a backgroundness field to suppress distractors and clutter. Experiments on Adroit, DexArt, MetaWorld, and the real-world SO101 platform show consistent improvements over DP3, achieving state-of-the-art performance across benchmarks. Notably, as distractor objects increase, DP3 drops sharply, whereas Attention-DP3 remains stable and outperforms DP3 by up to 31\% under heavy clutter. The code is publicly available at https://github.com/zhangzhongbo2213/Attention-DP3.

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### Feasibility and Memory Mechanisms of Chern-Simons Context Reservoir Computation

Authors: Jyotiranjan Beuria, Venkatesh H. Chembrolu
Published: 2026-09-10
Categories: cs.ET, cs.AI, cs.LG, cs.NE
arXiv: https://arxiv.org/abs/2609.13315v1

We investigate whether a Chern-Simons (CS) context reservoir is a viable computational substrate and whether evolving its gauge connection provides a benefit beyond simpler mechanisms. The reservoir state is a density fluctuation on a two-dimensional context manifold, whose drift is generated by a density-sourced connection. To separate generic reservoir behavior from gauge-specific effects, we compare four matched models: reciprocal transport, instantaneous transverse reconstruction, local nonlinear feedback, and fully coupled conserved-current CS dynamics. Across ten random seeds, the fully coupled CS dynamics propagates Gauss law to numerical precision, converges under spatial and temporal refinement, remains stable under constraint-compatible noise, and satisfies the spatial CS equation more accurately than the instantaneous controls. All four models exhibit fading scalar memory and distinguish matched pulse-order histories in density, with no resolved general advantage for coupled CS. The distinction appears in the flow geometry: coupled evolution supports circulating and longitudinal history channels simultaneously, retains them briefly after input removal, and yields a combined-feature pulse-order accuracy of \(0.879\pm0.035\), compared with \(0.679\pm0.065\) for the instantaneous-transverse control. The evolved connection also cannot be reconstructed from an instantaneous density snapshot or replaced by a fitted local multiplier. We therefore find a task-specific advantage for geometry- and order-sensitive processing, rather than generic reservoir superiority. Here ``topological'' refers to the gauge organization of the state; the reported memory and cyclic-lag measures are not topological invariants.

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### Task-Based CT Protocol Optimization Using Reinforcement Learning and Virtual Imaging Trials

Authors: Jiaqi Zou, David Fenwick, Vahid Tarokh, Nicholas Felice, Jayasai Rajagopal, Anuj Kapadia, Ehsan Samei, Navid NaderiAlizadeh, Ehsan Abadi
Published: 2026-09-10
Categories: cs.CV, cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.13309v1

Protocol optimization in computed tomography (CT) aims to improve diagnostic image quality while reducing radiation dose, but the interdependence of acquisition and reconstruction parameters makes exhaustive testing impractical. We propose a virtual imaging trial framework with reinforcement learning for efficient CT protocol optimization. Sixty-three computational human models with liver lesions were imaged using a validated CT simulator across 468 combinations of acquisition and reconstruction parameters, including tube voltage, tube current, reconstruction kernel, slice thickness, and pixel size. The optimization objective balanced liver lesion detectability, quantified by detectability index d-prime, against radiation dose. A Proximal Policy Optimization agent was trained and conditioned on patient-specific CT localizer embeddings derived from a pretrained vision transformer. On held-out patients, evaluating only 8 protocols per patient, about 2% of exhaustive testing, recovered 98.2% of the exhaustive-search oracle objective. With no patient-specific simulation, surrogate scoring alone achieved 89.7% recovery. Conditioning on the localizer improved zero-simulation recovery by 10.7 percentage points over the localizer-blind policy (paired 95% CI 2.9-19.5; p=0.02). These results show that the proposed framework can substantially reduce exhaustive protocol testing while enabling task-based, dose-aware protocol selection before the diagnostic scan.

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### GroundBench: A Factorized, Counterfactual Benchmark for Locating VLM Affordance Failures

Authors: Sarthak Sattigeri
Published: 2026-09-10
Categories: cs.CV, cs.LG, cs.RO
arXiv: https://arxiv.org/abs/2609.13308v1

A companion evaluation found that naming the target part in a manipulation prompt increased action accuracy by 0.32-0.63 across eight vision-language models, with no model outperforming a constant baseline until the part was named. However, naming the part supplies information that a real system must infer, confounding visual grounding, mechanical reasoning, and category-to-action association. We introduce GroundBench, a diagnostic benchmark that separates these explanations through six branch-and-merge conditions, each adding a controlled information bundle, and a counterfactual re-ask targeting a real alternate part visible in the same image. Across three OpenAI models and 1,068 predictions, supplying the target region without its identity leaves action accuracy at or below the 0.53 majority baseline (0.26, 0.26, and 0.53), although the models largely reproduce the supplied region. Supplying identity without location instead yields 0.74, 0.68, and 0.68. Every above-baseline gain in this curated set occurs where the supplied part category itself determines the action. A no-vision control leaves GPT-5's scores unchanged or improved, providing evidence consistent with substantial category-to-action association. GPT-4o mini declines on one condition, so this interpretation is not universal. Adding joint type and motion axis does not improve accuracy across six model-stratum comparisons. On 74 counterfactual pairs from 32 objects, GPT-5 achieves 0.86 pair-weighted compliance with a 0.07 shortcut rate but fails all observed push-to-lift-vertical cases. GroundBench identifies which supplied information changes affordance behavior and tests whether apparently grounded performance can be reproduced through textual shortcuts.

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### IMM-based Multiple Object Tracking using a State Prediction Neural Network

Authors: Chan-Bin Lim, Dong-Hee Paek, Seung-Hyun Kong
Published: 2026-09-10
Categories: cs.RO, cs.AI
arXiv: https://arxiv.org/abs/2609.13307v1

Object tracking is essential for autonomous vehicles to avoid obstacles and plan routes. Radar maintains detection performance even in adverse weather and can measure relative velocity through the Doppler effect, making it well suited for object tracking. In this paper, we propose a data-driven state PRedictor-based Interacting Multiple Model tracking method (PR-IMM) that improves nonlinear object-motion representation while preserving the stability and interpretability of physics-based motion models. The proposed method employs a transformer-based PRediction model (PR) that incorporates radar Doppler measurements to predict object displacement. The PR model is integrated into the IMM as a mode alongside the CV, CA, and CT motion models, and their prior positions are dynamically combined according to the mode probabilities. Experimental results show that PR-IMM reduces position-estimation error by 57.3% over the IMM and by 16.5% over the PR, while reducing ID switches by 25.3% and improving IDF1 by 9.6% over the IMM.

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### HGSQ: Heatmap-Guided Sparse Query Detector for Real-Time Aerial Small Object Detection

Authors: Yangchen Zeng
Published: 2026-09-10
Categories: cs.CV
arXiv: https://arxiv.org/abs/2609.13306v1

Real-time aerial small object detection is an important visual signal and image processing problem, requiring a detector to preserve fine-grained localization while avoiding redundant computation on large background regions. This paper focuses on this deployment-oriented aerial/UAV setting rather than claiming a universal detector for all object detection scenarios. Existing Transformer-based detectors provide strong global modeling, but their dense query initialization and multi-layer decoder still spend substantial computation on background tokens, which is inefficient when small objects occupy only sparse image regions. To address this problem, this paper proposes HGSQ, a Heatmap-Guided Sparse Query Detector for real-time aerial small object detection. HGSQ uses a lightweight Heatmap Budget Predictor (HBP) to predict a foreground budget map in a single forward pass. The predicted heatmap is then used by three fixed components: Heatmap-Guided Sparse Query Selection (HSQS), which initializes decoder queries from high-confidence foreground positions; Heatmap-Gated Lite Snake Convolution (HGLSConv), which performs local shape refinement only on heatmap-activated small-object regions; and Adaptive Query-Decoder Budgeting (AQDB), which adjusts the query budget and decoder depth according to the estimated object density. Unlike post-hoc heatmap generation, HGSQ treats the heatmap as a real-time computation budget rather than a visualization map during deployment. Experiments on NWPU VHR-10 and VisDrone2019 show that HGSQ achieves 95.10 mAP50 on NWPU VHR-10 and 54.8 mAP50 on VisDrone2019, while reducing GFLOPs to 48.6 and running at 96.0 FPS on an RTX 4070 under our TensorRT FP16 deployment protocol.

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### Adaptive Conformal Redistribution for Inter-class Transitional Uncertainty in Medical Image Classification

Authors: Saibal Ghosh, Samarup Bhattacharya, Sanjoy Kumar Saha, Umapada Pal, Tapabrata Chakraborti
Published: 2026-09-10
Categories: cs.CV, cs.AI, cs.LG, stat.CO, stat.ML
arXiv: https://arxiv.org/abs/2609.13303v1

Medical image classification is frequently complicated by transitional categories whose feature distributions overlap those of adjacent classes, producing ambiguous decision boundaries. Conformal prediction returns uncertainty-aware prediction sets, but these are not directly actionable in clinical screening, where a single decision is required. This work proposes adaptive conformal redistribution (AdaConRed), a label-free post-conformal decision rule that converts ambiguous prediction sets into refined class assignments. A five-stage pipeline is developed. Vision-language generative augmentation addresses minority-class scarcity; a frozen DermFoundation encoder provides embeddings; a lightweight multi-layer perceptron performs classification; an entropy-modulated, margin-aware nonconformity score constructs adaptive prediction sets; samples predicted as transitional with multi-label sets are reassigned to the most probable alternative class within the set, using only model outputs at inference. Evaluation uses the OSCC oral lesion and ISIC skin lesion benchmarks at a miscoverage level of 0.2. On the 3-class OSCC benchmark, overall accuracy improves from 73.54% to 77.38%, with oral cancer accuracy rising from 64.29% to 82.14% and benign accuracy from 56.57% to 70.20%. Reassignment of transitional samples reduces OPMD accuracy from 84.78% to 80.16%, consistent with the asymmetric cost of missed malignancy. On ISIC, overall accuracy improves from 85.83% to 87.19%, melanoma accuracy rising from 66.04% to 68.34%. AdaConRed outperforms LAC, APS and RAPS under an identical backbone and redistribution rule. Conformal prediction can be extended beyond uncertainty quantification toward actionable decision support where transitional disease categories are present, with gains concentrated in the clinically critical malignant categories. Code repository: https://github.com/saibal436ghosh/AdaConRed.

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### Variational Template Matching with Statistical Fusion for Anomaly Detection in Patterned Structures

Authors: Qinwu Xu, Yifan Jiang
Published: 2026-09-10
Categories: cs.CV, cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.13298v1

Anomaly detection in structured images is challenging in small-data settings where deep learning approaches are costly or impractical. Classical template matching is simple and interpretable but lacks robustness to geometric variations such as scale, rotation, and perspective. We propose a variational template matching framework that represents anomaly templates as a family of transformed instances and performs detection via normalized cross-correlation over this transformation space. To further improve robustness, we introduce a density-based statistical anomaly score derived from local intensity distributions using kernel density estimation (KDE). This produces a smooth representation that captures distributional concentration and tail behavior more robustly than histogram-based methods. The structural and statistical signals are integrated through a unified fusion formulation, enabling complementary modeling of geometric similarity and distributional deviation. Experiments on biological cell images demonstrate that the proposed method outperforms classical baselines and achieves competitive performance with ResNet-50 under a fully training-free setting, while providing explicit localization. The approach offers an efficient, interpretable, and practical solution for anomaly detection in structured image domains.

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### Robust Prototypical Networks for Few-Shot Sensor Fault Diagnosis

Authors: Mohammed Ayalew Belay, Amirshayan Haghipour, Pierluigi Salvo Rossi
Published: 2026-09-10
Categories: cs.AI, cs.LG
arXiv: https://arxiv.org/abs/2609.12287v1

Industrial fault diagnosis often operates with only a handful of labeled fault examples, making few-shot learning attractive for sensor monitoring. Standard prototypical networks are simple and effective; however, their class prototypes may become unstable in the very-low-shot regime because each decision relies on a small support set. We propose \emph{Multi-Episode Prototypical Networks} (MEPN), which aggregate prototypes from multiple disjoint support episodes and use their mean as the final class representative, reducing prototype variance without changing the encoder architecture. We evaluate MEPN on the DeFACTO sensor dataset using five-way fault classification with synthetic bias, drift, spike, and noise faults injected into real industrial measurements. Over 100 independent runs, MEPN reaches \textbf{\SensorOneShotGcpn\%} in the per-episode one-shot setting ($K\!=\!1$ shot, aggregated over $N_{\text{agg}}\!=\!10$ support episodes), substantially above single-episode baselines. Under an equal 10-sample support budget, MEPN and ProtoNet at $K\!=\!10$ are statistically indistinguishable, confirming prototype accumulation as the mechanism rather than superior fixed-budget learning.

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### T-GADE: Thermodynamical Generative-AI-Driven Evolution of LLM Artifacts

Authors: Kyoko Ogawa, Naoki Mori
Published: 2026-09-10
Categories: cs.AI, cs.NE
arXiv: https://arxiv.org/abs/2609.12286v1

Integrating evolutionary computation and large language models (LLMs) requires control of population diversity as well as generative capability. Among LLM outputs, those with explicit structure, such as a description paired with code, are structured artifacts; we use artifact for short. We propose T-GADE, which evolves these artifacts by extending thermodynamical genetic algorithms through LLM-based genetic operators and artifact-level diversity evaluation. A common free-energy objective supports generational and steady-state updates, with Fermi-type occupancy excluding repeated genotypes and Bose-type occupancy permitting them. We establish exact one-member removal and conditions for recovering the zero-temperature survival rule of Evolution of Heuristics (EoH). On the online bin-packing task studied in the EoH paper, excess measures relative bin-count overhead above a volume lower bound. Training excess uses search instances; transfer excess uses instances with another bin capacity. Generational Bose-type T-GADE at $T=0.003$ reduced median training excess by approximately 29%, from 1.152% to 0.815%, over 20 runs per configuration (two-sided Mann-Whitney $p=0.042$, Cliff's $δ=0.378$). Validation selection among its two highest-ranked final candidates reached the same median transfer excess as EoH, 0.496%. These results demonstrate the utility of thermodynamical selection and validation-based use of retained artifacts.

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### AnchorVLN: Geometry-Anchored Vision-Language Grounding Reasoning for Open-Vocabulary Navigation

Authors: Long Giang Vu, Chengkai Yao, Yuxin Liu, FNU Aryan, Rajath Chandrashekar Aralikatti
Published: 2026-09-10
Categories: cs.RO, cs.CV
arXiv: https://arxiv.org/abs/2609.12285v1

Vision-Language Navigation (VLN) in unseen indoor environments is useful in real-world robotics, where an agent must follow natural-language instructions, locate objects, and answer spatial questions without a pre-built map or fixed object vocabulary. Multimodal vision-language models (VLMs) provide strong open-vocabulary grounding and zero-shot reasoning, but struggle to emit reliable metric quantities such as range, bearing, and comparative spatial relations directly from images. Existing approaches address this by folding geometry into hand-engineered pipelines or asking models to output waypoints, requiring changes to the control stack for different robots, tasks, or vocabularies. We introduce AnchorVLN, an open-vocabulary VLN system built on a simple rule: the VLM proposes semantics; geometry decides metrics. It is realised as EMBODIED-NAV-MCP, a Model Context Protocol (MCP) server driven by a VLM agent through a compact set of callable tools. Since no tool accepts distance in metres or bearing in radians, the schema enforces the semantic-geometry boundary without modifying the downstream autonomy stack. We benchmark both tasks of the CMU Vision-Language Navigation Challenge 2026: 30 instruction-following questions over 15 scenes and a frozen 45-question object-reference set. The full system achieves 64.4 percent on instruction following, dropping by 13.3 percentage points without controller modeling (t = 2.77). On object reference, geometric anchoring clears the challenge overlap threshold on 10 of 45 questions, versus 0 of 45 for direct coordinate estimation, reducing median center error from 3.37 m to 2.48 m.

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### Amortized Low-Rank Adaptation for Model-Based Reinforcement Learning

Authors: Fernando Palafox, David Fridovich-Keil
Published: 2026-09-10
Categories: cs.LG, cs.AI, cs.RO
arXiv: https://arxiv.org/abs/2609.12278v2

World models let agents plan by predicting the consequences of their actions, but changes in the environment can make them inaccurate. We study the problem of adapting a world model to an unknown test-time environment, drawn from a known environment family, using only a few episodes of interaction. Existing approaches trade off computational cost against expressivity, i.e., the range of models a method can produce. For example, in-context learning is computationally cheap but limited in expressivity, and gradient-based adaptation is expressive but computationally expensive. We present CLAW (Context-conditioned Low-rank Adaptation of World models), which addresses this tradeoff by using a hypernetwork to generate low-rank (LoRA) adapters at test time. During pretraining, we simulate adaptation to a variety of environments and jointly train the hypernetwork and base world model. At test time, we freeze the base model and use a forward pass of the hypernetwork to generate adapters from a small batch of test-time transitions. We evaluate CLAW in locomotion and manipulation environment families that vary in dynamics, embodiment, and reward. We show that, using only seconds of test-time data, CLAW outperforms gradient-based adaptation and in-context learning during online adaptation. We also show that CLAW avoids overfitting in data-scarce regimes, that its advantage comes from the expressive adapters rather than context conditioning, and that pretraining the hypernetwork jointly with the base model outperforms training it post hoc.

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### Reinforcement Learning over Patient Trajectories for Clinical Reasoning in EHR Foundation Models

Authors: Yuxin Xiao, Sheng Zhang, Chandan Singh, Tristan Naumann, Hoifung Poon, Jianfeng Gao, Xiaodong Liu
Published: 2026-09-10
Categories: cs.LG, cs.AI, cs.CY
arXiv: https://arxiv.org/abs/2609.12277v1

Electronic health record (EHR) foundation models trained on longitudinal patient trajectories have demonstrated strong performance across diverse clinical prediction tasks. However, their clinical reasoning capabilities remain constrained by next-token prediction on limited and incomplete EHR data. To address this, we propose a reinforcement learning (RL) fine-tuning framework that treats EHR foundation models as generative policies over patient trajectories. We formulate common clinical prediction problems (e.g., hospital readmission) as event-conditioned, time-windowed reasoning tasks. We then design time-aware, rollout-sensitive rewards to account for finite rollout lengths and temporally inconclusive outcomes. We find that RL fine-tuning consistently improves over pre-trained backbones and strong baselines. Notably, it enables smaller models to surpass larger pre-trained models in data-limited regimes and induces positive transfer across tasks. Further analysis shows that RL fine-tuned models generate trajectories with stronger structural and semantic alignment to ground truth and greater downstream utility.

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### Recommendation Retrievers Need Verifiers: Universal Generative Reranking for Sequential Recommendations

Authors: Benyu Zhang, Qiang Zhang, Rui Li, Qunshu Zhang, Devansh Tandon, Neeraj Bhatia
Published: 2026-09-10
Categories: cs.IR, cs.AI
arXiv: https://arxiv.org/abs/2609.12270v1

First-stage recommenders in multi-stage systems produce a ranked candidate list from which a limited prefix is forwarded to downstream rankers. Because each forwarded item must be processed by more expensive ranking stages, this shortlist cannot be arbitrarily large. The first-stage objective is therefore high coverage of relevant items within the forwarded prefix, commonly measured by Recall@$k$. A relevant item may be available deeper in the retrieved list but absent from the shorter prefix that is actually consumed. This paper studies post-hoc verification for promoting such candidates into the consumed shortlist without retraining or replacing the retriever. We introduce a lightweight generative verifier for retrieval models. Given a retriever state and a candidate item, the verifier scores the item through the likelihood of its identifier tokens. It is trained post hoc with next-token cross entropy, requires no sampled negatives or candidate pool during training, and scores only the retriever's top-$K$ candidates at inference. The interface is minimal: the retriever supplies a query state and candidate items, and the item representation can use any fixed tokenization. Across Amazon product recommendation and YaMBDa music recommendation, the same verifier training recipe improves Recall@10 for SASRec, GRU4Rec, NextItNet, and MiniOneRec. Ablations show that the improvements are not explained solely by injecting item-content features into the retriever, supporting verification as a post-hoc output-side adaptation mechanism.

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### EAR: Entity-Aware Partitioning Approach for Retrieval-Augmented Generation Development

Authors: Cenab Batu Bora, Oylum Alatlı, Sebnem Bora, Oguz Dikenelli
Published: 2026-09-10
Categories: cs.CL, cs.IR
arXiv: https://arxiv.org/abs/2609.12268v1

Retrieval-augmented generation (RAG) can improve knowledge-intensive question answering, but the first design choice is easy to overlook: how should the source corpus be partitioned into retrievable units? Fixed-size chunks often return long passages whose relation to the question is only implicit. We introduce EAR, an Entity-Aware Partitioning approach for multiple-choice question answering (MCQA). EAR extracts normalized surface anchors from the question, answer options, and corpus; retrieves local windows around matching corpus anchors; and can attach a larger parent passage through an extractive summary. We evaluate EAR on a cleaned Massive Multitask Language Understanding (MMLU)-style subset of 153 questions selected by an automatic corpus-support heuristic and using decontaminated public textbook text. Across same-protocol top-k = 3 and top-k = 8 sweeps with Mistral, Gemma, and DeepSeek, EAR entity-window reduces retrieved words by 37.5-40.2% relative to chunks. Observed accuracy changes are +5.2, +1.3, and -3.9 points at top-k = 3, and +5.9, -3.3, and -4.6 points at top-k = 8; none of the entity-window differences is statistically significant. The scoped contribution is methodological: EAR provides a compact and inspectable retrieval unit, while its rule-based anchor extractor remains domain-specific and requires separate validation before transfer.

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### Learning Symbolic Constraint Representations from Examples: A Neuro-Symbolic Approach

Authors: Nassim Belmecheri, Arnaud Gotlieb, Nadjib Lazaar, Helge Spieker
Published: 2026-09-10
Categories: cs.AI
arXiv: https://arxiv.org/abs/2609.12267v1

Learning user-defined concepts as constraint networks has been extensively studied in the constraint acquisition (CA) literature. However, existing approaches typically rely on intensive interactions with a human oracle, making the learning process costly in terms of time and number of queries. In this paper, we propose a neuro-symbolic framework for automatic CA that significantly reduces user involvement by introducing neural Oracle Transformer models which learn to emulate user responses and to generalize conceptual knowledge. Trained on previously available examples, the learned oracle interacts with a dedicated CA engine, FastCA, which systematically refines the oracle's responses into a sound, consistent, and interpretable constraint network. This neuro-symbolic interaction enables the recovery of structured symbolic models from data without prior domain knowledge. Our results demonstrate that this neuro-symbolic interplay effectively aligns data-driven pattern recognition with symbolic reasoning, offering a robust approach to automating model construction in combinatorial domains.

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### GTA: Graph Theory Agent and Benchmark for Algorithmic Graph Reasoning with LLMs

Authors: Zixiang Xu, Yanbo Wang, Chenxi Wang, Lang Gao, Zirui Song, Yue Huang, Zhaorun Chen, Xiangliang Zhang, Xiuying Chen
Published: 2026-09-10
Categories: cs.AI
arXiv: https://arxiv.org/abs/2609.12265v1

Large Language Models (LLMs) are increasingly asked to reason over structured data such as graphs, yet how reliably they can carry out multi-step graph algorithms in language remains unclear. Existing evaluations tend to use simple tasks on small graphs, to score code generation rather than reasoning over the graph itself, or to fix a single input format. We introduce Graph Theory Bench (GT Bench), a benchmark covering 24 classical graph problems in 44 task-structure settings, with over 100,000 examples across four representations: natural language, structured language, adjacency list, and adjacency matrix. Evaluating eight LLMs on GT Bench shows that accuracy is strongly tied to the input representation, that the best representation shifts with graph density, size, and topology as well as with the model, and that this sensitivity persists, attenuated, in the strongest reasoning models. Building on these observations, we propose the Graph Theory Agent (GTA), which pairs a preference-trained representation selector with plan-and-decompose scaffolding around a frozen executor LLM. GTA lifts Phi-4 from 53.5% to 69.1% on the benchmark's easy split and from 33.0% to 41.5% on its hard split, outperforming eight prompting and agent baselines, and transfers without retraining to GraCoRe and NLGraph. Code for benchmark generation and evaluation: https://github.com/xzx34/GTA. The project homepage is available at https://xzx34.github.io/gta/.

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### Adaptive Chemotherapy Control under Tumor Heterogeneity via Reinforcement Learning

Authors: Bereket Sitotaw Kidane, Md Samiul Haque Motayed, Shuo Wang
Published: 2026-09-10
Categories: cs.LG, eess.SY
arXiv: https://arxiv.org/abs/2609.12264v1

Designing effective chemotherapy regimens is hindered by tumor heterogeneity and drug resistance, which complicate the deployment of patient-specific model-based optimal control across diverse populations. We develop and compare closed-loop deep reinforcement learning (DRL) dosing policies with continuous (TD3) and discrete (DQN) action spaces trained on a high-dimensional heterogeneous tumor model. The DRL policies are benchmarked against a Pontryagin's Maximum Principle (PMP)-derived open-loop benchmark. We assess generalization under parametric heterogeneity using a 100-patient virtual cohort with plus or minus 10 percent uniform perturbations in growth and drug-sensitivity parameters. Across this cohort, TD3 achieves higher average tumor reduction, while DQN yields tighter inter-patient dosing consistency, revealing a clear efficacy-consistency trade-off in this study. Our simulations assume full observation of all tumor subpopulations; translation to sparse and noisy clinical measurements will require partial-observability formulations and/or state estimation. Overall, the results show that simulation-trained DRL can learn state-dependent feedback dosing policies that complement open-loop optimal control benchmarks.

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### Revisiting Multi-Object Tracking Baselines: Hyperparameter Optimization with Multi-Fidelity Greedy Coordinate Search

Authors: Momir Adžemović
Published: 2026-09-10
Categories: cs.CV
arXiv: https://arxiv.org/abs/2609.12261v1

Multi-object tracking (MOT) is dominated by the tracking-by-detection paradigm, whose methods typically rely on a small set of hyperparameters that are conventionally chosen by hand. Tuning them requires repeated expert-guided experimentation, while the procedures used to select reported values are often not systematically evaluated or fully documented. Hyperparameter optimization (HPO) automates this process, yet it remains rarely used in MOT, and existing studies applying HPO to MOT predate modern deep-detector-based trackers and HOTA evaluation. We systematically apply HPO across two datasets and four tracking-by-detection methods. We also propose Multi-Fidelity Greedy Coordinate Search (MFGCS), which optimizes one hyperparameter at a time by first evaluating candidate values on a small subset of scenes and re-evaluating only promising candidates on the full dataset. Across all eight tracker-dataset combinations, the Tree-structured Parzen Estimator (TPE) and MFGCS outperform both our hand-tuned configurations and the corresponding published results, with improvements of up to 4.38 and 16.05 HOTA points, respectively. MFGCS also reaches a predefined HOTA target faster than TPE in seven of the eight combinations. Within each tracker-dataset pair, all optimizers share the same search space and evaluation pipeline, isolating the effect of the search strategy. We release the code and tuned configurations to enable future work to compare against systematically optimized rather than default or manually tuned baselines.

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### HypoKG: Evidence-Disciplined Biomedical Hypothesis Generation Beyond Endpoint Knowledge

Authors: Dominic Okonkwo, Adetayo Okunoye, Ismailcem Budak Arpinar
Published: 2026-09-10
Categories: cs.CL, cs.AI, q-bio.QM
arXiv: https://arxiv.org/abs/2609.12260v1

Large language models (LLMs) can generate biomedical hypotheses, but it remains unclear whether they truly reason from scientific evidence or simply produce convincing-sounding ideas. To study this, we combine three major biological databases: the Kyoto Encyclopedia of Genes and Genomes (KEGG), Rhea, and UniProt, into a unified biochemical knowledge graph and construct a benchmark of 550 paths connecting enzyme sources to rare disease endpoints, yielding 13,200 hypotheses from six LLMs under four conditions varying the biological information each model receives: source enzyme only, full biological path, or source and disease endpoint only. Hypotheses are scored using an expert-derived five-criterion rubric on a 1-5 scale per criterion. We find that models given both the source and disease endpoint often produce the highest-scoring hypotheses, showing that LLMs can generate compelling ideas from minimal information. However, these hypotheses are less grounded in the evidence. In contrast, models given the full biological path generate hypotheses more consistent with known mechanistic relationships. We call this evidence-disciplined reasoning. To confirm this effect, we shuffled intermediate path steps while keeping endpoints fixed. Evidence grounding dropped significantly (delta = -0.793, p &lt; 0.001), confirming models genuinely used path structure during reasoning. Our findings show that knowledge graphs support hypothesis generation in two ways: they identify biological endpoint pairs absent from the literature, and their mechanistic paths guide how LLMs reason between them.

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